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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15930  (registered. 2012)
Contig Information
Length 805 bp
Clones alternative view 22 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 1
Wh_OKCS Seed DPA5 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
WH_CA 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|6136559|sp|O48609.1|RRP3_HORVU|RRP3_HORVU RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:"
Score 330
Evalue 1.00E-88
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig15930 
CAAGCCTTGCGAGGATTAAATCAAAATTCATTTTCCACAAACAGAATCATACGAGAACAGATTGAATCGATCGATCTACAGGATCATGTACCATGTGGCA
TTGTGGCTTTAACATTACTGAACAACAAAGCAAGAAGAAAGACACTAAACAGCTCGTGAGGATGGGAGAGCAGCGAGCCCCTCATGTCGATAAGCTGCCG
CCGCCTTGCTGCCAGAGGTTGATGATGTCAGTGGCCTGGTTGAGAAGGATGATCATCTGCTTCTGCGAGATCCACTCTTTCTCCTCCAGCTTCGCTCTCA
GTTCCTCCCATGCATCTTTCCGTGGCCAGAAGTAGTACGGGCTTAAGGGGATGCTACCAACACCCGGAACCATCTGGTCAAGCGCTATGCCGATGTTCTT
CTCCATCCATATGAACTTTAGTACCAGCATTGGGTCCTGCTTTTCAGGCACCTCCACCTTGTACTCCTCGCTTTCCGCCACGGATTCCGCATCTCCTTCT
CCGCCAAGTGGCTCCTCGTCCCCCAAACCGACGTATGGCTCCCCCGCTTCGACGGCGCCGGCGGCGCCGGCGGCGAGGATGCGGAGCGAGCGAAGGGGAA
GCCTCCTGCTCTTGAAGTGGACGAGGCTGGAAGAGGAGGAGGAGGAGGAGGAGGAAGGGGATGTGGAAGGTCTGGGCAGGGAGACGCGGGGCCGCGACGC
GAGGGCCGGCGTAGTAGCGGGGTGGACGGACATCGGGAGCATGGTGTACTTCCGGATAAGAAGAGAGGAGGAAGACGATGATGCCACACCTCTTCCCCTC
GTGCC
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