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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12764  (registered. 2007)
Contig Information
Length 1369 bp
Clones 6 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 1
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 2
Wh_yd Spikelet at late flowering 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0519400 [Oryza sativa (japonica cultivar-group)] >gi|52353695|gb|AAU44261.1| putative N-ethylmaleimide sensitive fusion protein [Oryza sativa (japonica cultivar-group)] >gi|113579614|dbj|BAF17977.1| Os05g0519400 [Oryza sativa (japonica cultivar-group)] >gi|215706372|dbj|BAG93228.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1315
Evalue 7.51723e-143
Total Hit Count 287
Registered year 2007
Contig Sequence     [ Download ]
>Contig12764 
agcttcgaagttagtatggcaagaaagtaactgtccgatatatagatgaaactgccaacTTATCTATATatcaaccaaactctaaaagCGCATCCTGGAG
GTATGGATTGGTATCCCTAGTCATCAACAACACCATTCACCAAATAGCATGGCCAGGTAAATATTTCTCAGGCACGGCGCCAAGGTCTCAAACAAAACAA
GCCCTAAGGCTTCAGATAACAGAATGTTTATATCGAGGGAAGCATAGCAAAGAGACAACTCTCGCCG*AACCGTG*ACAATGAAAGGCCACTCGGG*ATC
AAGCCACTCTACCCTGTGAAGATAGCAAGCTGGGGAAACTGGAGTAAACAAATTCCTATAGTGGAGCCTAGGGTCCTCAGATGTATGTGTGATCAGTAGC
GGATGATGTCGCTCAAGATGCTAAAGAAATGGTTGAGGTCGATCTTTTCCTCTCCGGCATAGATGGCTTCCGCGCTTCCCCCTTGTGGCCCCTGCGCAGC
CATCTCGACAAGCGTGTACAGCTTCTTGATCGGCATATCGTCCAGCGCTTCTGCTGCAGTCTCAACATCTCCTTCATCGAACACATTCAAATGTCGCAAC
ACCTTTGCAGCATCCTCCTTTGTCAGTTTGGGAACCTCGTAGGTCACCGAGAACACACCAGACATACCAATGGAGTCTAGAAATGTTGTCTCACTTGTTG
TTCCAATAACAAGCAAGTTCTTACCCTTAGGAGGAACCctcttgaggaggaccataagagtttgcgatatcagatttgaaaaacgtggtccgatggcAAC
AAACTCCAGTAACCTTTCAATGTCGTCAAGAATTATGatactGAACTGAGATTTGTAAGCATCCTCAAAAACCTTGCAAATCTGTGCACACTTGCTGCTT
TCACTGAAACCAATCATTGTCTCCGCAGATATAATTTTGACATAAGCAAAATCACTGTCAATACCAACAGTAGcggccaaagctgatttaccacttccag
cagaaccttgcaatagacaggtcacaagtgggctacctctgctaactttaacttgttccaccagaagcatagctctctgaaaaatgtgctggtgtgcctt
gccacagtcaacaataccatgtaacctgcatctttcgaggtcatcagttgaagcaccaaatgcgggagtaatttcatgaagtccattcacaaaatcatcc
atagtaaccttaatgctttcctcgtccaaaggtttagtgagatcatccatgcttatctgccggttcaaagcaaatgaaactgcacttttaacaacacctt
ccaactctgctccactgtagttctttgttcgtgcagctagctncttgaagattaacatcggagaaaggc
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