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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11598  (registered. 2012)
Contig Information
Length 2042 bp
Clones alternative view 1050 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 51
Wh_dL Crown of seedling 38
Wh_e Seed DPA10 9
Wh_f Spike at flowering date 57
Wh_h Spike at heading date 60
Wh_oh Pistil at heading date 3
Wh_r Root 50
Wh_yd Spikelet at late flowering 72
Wh_CSEC Callus 11
Wh_DPA20 Seed DPA20 74
Wh_EM Dormant seed with water absorption 15
Wh_EMI Dormant seed with water absorption after breaking 13
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 12
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 3
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 9
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 16
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 15
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 16
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 28
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 15
WH_XN Leaves, plant was grown at constant 23Ž 30
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 27
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 55
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 47
WH_XR Roots, 18 day old plants were grown hydroponically 48
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 41
WH_XT Roots, 18 day old plants were grown hydroponically 21
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 36
WH_XA Root 19
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 11
WH_XD Root, treated at 50 microM Al for 6h 16
WH_XE Seedling, infected with leaf rust 12
WH_XF Seedling, infected with leaf rust 19
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 18
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 14
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 14
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 10
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 14
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|147826550|emb|CAN70790.1|| hypothetical protein [Vitis vinifera]
Score 160
Evalue 4.00E-37
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11598 
ACGAGGCCTTGCAGGACGCCTTCGTGCAAGTGATCCTCCCGTGCTCTTCACGGGCGGAGGCTTGGTTGGTTTGACCGCTTGTTGGCTACTAAGCGCATGA
GTAGCTTTGGACCCGTGTCTGCCGGTAGATCCCCCGTTGTACTGCGGCCGACTACCGGCGCCGTGTCCCGTCCCTCGTGTGGCTTCGAATCGCTGGATTA
AGAGTGCTTGCGTGCTAGTACCCGACCTACGGGAAGTGGTGCTTCGGATAATTTTTGCCTCGCGGCGGACGCCCATTGGGTGTGCCGCTGCGGCCAAATA
GCGCTTGCGGCGTTGCCTCGTGGGGCTGGCACATTACGTGCCCGTTGCTATCAAGGCAACCTCGCTCCCGCTTTTGGTCTCGGATGCTGCTGACGATAAA
GGGTCGTGGCCCTTTCGGTTGCCTCGACCCGACCCAAAGCTCTCGGAACTGAGAACAACCGGAACAGGAGTTGCCTCTACCTCTCCACAGTTATGTGGTA
GGATACGCAACTCTCTGCGCCGATCCTCAAGGATGATGAGCTGTGCCGCTCAAGAGCGACGACCGGCCCGGCTGTTGCCTCTGAGTTTCCACGGAAGTGG
AAGCGCAGAACGATGGCCGTGCTGGTAGTCACCAAGGACGTGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATG
TGCAAGTATGAACCAATTTGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATT
CTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCTCGCTGATCCGATGATTCATGA
TAACTCGACGGATCGCACGGCCTTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGA
CGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGAC
ACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGG
CAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCCGGGTCGGC
CGGTCCGCCTCACGGCGAGCACCGACCTACTCGACCCTTCGGCCGGCATCGCGCTCCTAGCCTTAATTGGCCGGGTCGTGTTTCCGGCATCGTTACTTTG
AAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA
GTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAA
GGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGAT
GTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAA
GGGCACCACCAGGCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTC
TTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAAAACGAACGAGACCTTAACCTGTTAAATAGTAT
AATTAAAATTGAATACAAATTCTTGAAATTTGAAAAAAAAAA
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