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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig13760  (registered. 2002)
Contig Information
Length 753 bp
Clones 8 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 2
Wh_oh Pistil at heading date 2
Wh_yd Spikelet at late flowering 1
Wh_yf Spikelet at early flowering 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0367900 [Oryza sativa (japonica cultivar-group)] >gi|57012942|sp|Q7G8Y3|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog >gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] >gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] >gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] >gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa (japonica cultivar-group)] >gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group]
Score 431
Evalue 9.17632e-41
Total Hit Count 224
Registered year 2002
Contig Sequence     [ Download ]
>Contig13760 
tttttttttTAGTCGTTTGCATACCATCTTCATGCGCAAACACCAAAAAGGCCCGGCCAACATTCAATGTTCAAACCGATCCTGATGCACTCACTGCAGG
TGGCGCCACAACACGTG*CATTAAACTTACTTGGACAGTGATTAACCTAACCAAAGATCCGTTGAGCATATATATTACACTAAGATAGGAGGCTTCAAGC
GCTGGAAGAAGCCGAGCCCAAAACATCTCCTGACAA*G*G*CAACATCGGATCACCCGCGCTTACGCCTTCCCCTTCTTTCCCGAGCCCAGGAAATCATC
CATAAGGGACTGCCGCCGCTTCTTGGATGAGGTCGCTGGAGCCGTCTCACCAGCTCGCTTTGTAGGTGTCATTTTCTGCTTTGTTGGTGTCTTATTCTTC
TTGGATGGATTCGCTGGAGCCGTCTCGCCGTCTGAAACCCTTGATGCAGCTTGCTTTGTTGGCGTCGTCTTCTGCTTTGTTGGCGTCATCTTCTGCTTTG
TTGGTGTCATCTTCTTAGCAAGCCTTTTCTCTTTCCGTGCCTGCCTCTCTCGCTCATCGTATTCTTGGTTCTCTTTCTCAACTAGGCGGACAAGCGTGTC
GCACCGCCTAGCCAGCTCTTGTGCACTTCTCGCCTTCACAAACCAATCGAATCGGAACAAGGGTGACATGCGGAaggcagatctaagttcatcccacttc
ccgtaaccaagcttgtgcgccatgcatagcataaaacggtcacattcctcgtt
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