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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4564  (registered. 2012)
Contig Information
Length 1420 bp
Clones alternative view 175 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 9
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 8
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 5
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_VABA Shoot with ABA treatment 5
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 5
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 13
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 9
WH_CA 1
WH_SP 2
WH_XA Root 7
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|11124572|emb|CAC14917.1|| triosephosphat-isomerase [Triticum aestivum]
Score 494
Evalue 1.00E-137
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4564 
GGCGGTGGACGAGCAGTTGCATGCGGCCCCTACGGGACATGCGGCACACAACGGAGTGACCGGCGAAAGACACAACCGATCAGCCGATACACATTATTAT
CATTAATAGGAGCTAAAGATTATTGCTGATATATGTTCAGTAGCAAACATTATCATTATTGGCTTGCAAGCTCAAGTCAGGGGGGGAGGAAAACAGTAGC
AGCTGCTCCACCACAAAATTACTAGCATAGTACACACATAATAAACACAGGAGAAAAAAGGAGTCTCTTCATCTTCGCTGTCTTCCTCCGCACCGAGAGG
AGCCACATCAAGATTTTTCTTAGGCGGACTTCACGGTGGCGGCGTTGATGATGTCAATGAACTCAGGCTTCAAAGAAGCTCCACCAACGAGGAAACCATC
AACGTCGGGCTGCCCTGCCAACTCCTTGCAGCTTGCGCCAGTTACAGATCCTCCATAGATGATCCTCGTGGATTCAGCAACCTCGGGGCTCACATTGGTC
TTGAGCCAGTCCCTCAGATTGGCATGGACTTCCTGCGCCTGAGCCGGTGTCGCAACTTTACCGGTGCCAATGGCCCACACTGGTTCGTAAGCGACAACCA
CATTGGTCCAGTCCTTGATCTTGCCAGCAATTGCTTTTGTCTGTTCAGCGACAACTGCCATGGTTGATCCAGCTTCTCGCTGCTCGAGAGTCTCACCAAC
ACATGCAATGACCTTCAAGCCCTGAGCAAGTGCATATGCAACCTTCTCTCCAACAAACTCGCTTGATTCTCCCATCAAGCTCCTCCTTTCAGAGTGTCCA
AGGATGACCCAGGGAACGCCGAGGTTGACAAGCATCTCAGCACTGACTTCACCGGTGAAAGCACCGCCCTTCTTCACCCAGCAGTTCTGAGCAGCGACTT
GGATCTCTGGGCGCAGCTTACCCTTGACGGTGGGAAGGAAGACATAGGGCGGGCTGACGACAACCTCGACAACATCCGTAGAGGCGATCTGTCCAGCGTT
CAGAGTGTTGACGATACTCTCTACCTGTTCCACAGTTCCATTGCATTTCCAGTTGCCGCCGACGAAGAACTTGCGGCCCATGGCGACGGAGGAGGGGGGA
GATCGGATCGGGTTGGGAACGACGGGCGGACGGGAGAGGGGGAGGTCGAGATTGGATTTGGTGGCGGCAGGGTGTGCCCGTTGTGTCGTGGGGACGTCTG
TGAAGGTGTTGTTGCCTCATGAAGACCTTGGCACCGGCTTACCCCCTCAAGGCGCCTCTTGAAGACGGTAGCGCCGCCACATCTCTTGCAGCCATGGACG
AAGCTGTTTGGTTGGTCTGGAGAGGGCTGATTCCCCATTGCTGAAACATGCGATTTCAAGCATTGATTCGACATGTCAAGTTCCCAGAATATAACAAAGA
CCTGTACATATCTTTTGTAG
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