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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig13471  (registered. 2012)
Contig Information
Length 995 bp
Clones alternative view 206 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 6
Wh_r Root 2
Wh_SH - 1
Wh_CSEC Callus 10
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 8
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 15
Wh_SHC Shoot grown with cold treatment 1
Wh_VABA Shoot with ABA treatment 6
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 10
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 8
WH_XR Roots, 18 day old plants were grown hydroponically 11
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_SP 1
WH_XA Root 19
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 17
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115464585|ref|NP_001055892.1|| Os05g0489600 [Oryza sativa (japonica cultivar-group)]
Score 366
Evalue 3.00E-99
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig13471 
TTTTTTTTCAGAAGACACGGTGACAAACTATGCCAAGACAAGTCAATACTACAATGTATCAAGTCTGTCGGAGTGGCGAGTACAGAGTACAGAGCGGACA
TAGTAAAGCCATGATGGGCAAACAAACAGCGCCACGGACAATTTAACACCCACGAAAACAATCTGATAGCTAGCTCTTTGACAGAGAGCTTTATCTTTCC
AAAACACCCACATTATCTGTCAAGACTATATAGTTTATAATACGTAAAGGCAGTATTAGTCCGAATATCCAGCTTATCCAGATCCATAGAAGCCCCTGCC
GAGATGCTTCAAGCCTTGTTGGCAATGTTGTTGGACAGCCAGTCAAGGCCCTCGTACAACCCCTCCCCAGAGGTAGCACATGTGCTCTGGATGTACCAGT
GTCGCTGGCGCAGGGAATGCAGGCCAAGCTTGTCAGTGATTTCAGCAGCATTCATGGCATTAGGAAGATCTTGCTTGTTTGCAAACACCAGCAGCACAGC
ATCACGCAGCTCATCCTCATTCAGCATCCGGTGAAGCTCATCTCTTGCCTCAACAACACGCTCTCTGTCATTGCTGTCCACGACAAAAATGAGACCCTGG
GTGTTCTGGAAGTAGTGCCTCCACAGGGGCCTGATCTTGTCCTGACCCCCGACATCCCAAACGGTGAAACTAATGTTCTTGTACTCTACAGTTTCGACAT
TAAACCCGATTGTGGGGATGGTGGTGACGATCTCTCCGAGCTTGAGCTTGTAGAGGATGGTGGTCTTACCAGCCGCATCGAGACCGACCATGAGGATCCT
CATCTCCTTCTTGGCGAAGAGCCGGCTGAACAGCTTCGTGAACGTGAGCCCCATCTCCGCTCCTGCGCGAGATCGCGGCGCCTGCTGTCGTGTGCGCGCG
CTGGGCTCGGTGGTCTCCTCTTCTCTTCCTTTGCCCTCCTCGCGCCGGGTTCCTCCCTGGTTCGGGATCGGTGGCAGGAGGAGGAGAGAAATGTG
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