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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VHS_all.Contig990
Contig Information
Length 630 bp
Tissue Shoot with heat shock treatment
Clones 4 Clones [Download: CSV  ,  FASTA ]
whvh10c21    whvh2f07    whvh2m13    whvh17g14   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0502700 [Oryza sativa (japonica cultivar-group)] >gi|42407771|dbj|BAD08917.1| putative aminotransferase [Oryza sativa Japonica Group] >gi|42408130|dbj|BAD09269.1| putative aminotransferase [Oryza sativa Japonica Group] >gi|113624139|dbj|BAF24084.1| Os08g0502700 [Oryza sativa (japonica cultivar-group)] >gi|125562079|gb|EAZ07527.1| hypothetical protein OsI_29783 [Oryza sativa Indica Group] >gi|125603927|gb|EAZ43252.1| hypothetical protein OsJ_026735 [Oryza sativa (japonica cultivar-group)] >gi|215693999|dbj|BAG89198.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215694380|dbj|BAG89373.1| unnamed protein product [Oryza sativa Japonica Group]
Score 842
Evalue 1.39796e-88
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VHS_all.Contig990 
GGCTCTTCCCTGGTCACCGGCGAGAAAAAGCAAGATGGACTACATGAATGGGCCAGGCCGGAACCACCTGTTCGTCCCTGGGCCGGTGAACATCCCGGAC
CAGGTGATCCGCGCCATGAGCCGGCAGAACGAGGACTACCGCTCGCCGGCGATCCCTGCCCTCACCAAGACCCTGCTGGAGGACGTGAAGAAGATCTTCA
AGACCACCACCGGCACCCCCTTCCTCTTCCCCACCACCGGCACCGGCGCCTGGGAGAGCGCGCTCACCAACACGCTCTCCCCGGGGGACCGGATCGTGTC
CTTCTCGCTGGGGCAGTTCAGCCTGCTGTGGATCGACCAGCAGCAGCGCCTCGGCTTCAGCGTGGACGTGGTGGAGTCCGACTGGGGCTACGGCGCCGAC
CTCGGCGCCCTCGAGTCCAAGCTCCGCACTGACTCGCAGCACACCATCAAGGCCATCTGCATCGTCCACAACGAGACCGCCACCGGCGTCACCAACGACC
TCCACGCCGTCCGCAAGCTCCTCGATGCGTACCGGCACCCGGCGCTGCTGCTGGTGGACGGGGTGTCGTCCATCTGCGCGCTGGACTTCCGCATGGACGA
GTGGGGCGTGGACGTGGCGCTGACGGGGTC
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