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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24791  (registered. 2007)
Contig Information
Length 2814 bp
Clones 41 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 8
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 3
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 9
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 2316
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24791 
CTCTCCGCCGCCGCTTCCTCATCTCATCCTCCCGGATCGGGAGGCGGAAGCCAAGCCCCAAGAAACTTAAATTCTCGGTGTGATATTCAAAAGCAGTCAA
GATGGTGAAGTTTACCGCGGAGGAGCTCCGTGGAATTATGGACAAAAAGAATAATATCCGTAACATGTCTGTTATTGCTCATGTTGACCATGGCAAATCT
ACGCTTACGGATTCCCTTGTGGCAGCAGCTGGGATTATTGCCCAGGAAGTAGCTGGTGATGTTCGCATGACCGATACCCGTGCAGATGAGGCAGAACGTG
GTATTACAATCAAATCCACGGGTATCTCTCTTTTCTATCAGATGACTCCTGAATCACTTGAGATGTACAAGGGCGACAGGGATGGTGATGAGTACCTGAT
CAACCTTATTGATTCACCTGGCCACGTTGACTTCTCTTCAGAAGTCACAGCTGCTCTTCGTATCACCGATGGTGCTTTGGTTGTTGTTGACTGTATTGAG
GGTGTCTGTGTGCAGACTGAAACTGTGCTGCGCCAAGCTCTTGGTGAGAGGATTCGGCCTGTCCTCACCGTGAACAAGATGGACAGATGCTTCCTTGAGC
TTCAAGTGGAAGGTGAGGAAGCATATCAGACTTTCTCCCGTGTCATTGAAAATGCCAATGTCATCATGGCAACATATGAAGATGTGCTCCTTGGTGATGT
CCAAGTGTACCCAGAGAAGGGGACTGTTGCATTCTCCGCTGGTTTGCATGGGTGGGCTTTCACCCTTACAAACTTTGCTAAGATGTATGCCTCCAAGTTT
GGAGTTGATGAGGCGAAGATGATGGAGAGGCTTTGGGGTGAGAACTTCTTTGACCCAGCCACAAAGAAATGGACCTCCAAGAACACTGGGACAGCTACCT
GCAAGAGAGGTTTCGTTCAGTTCTGCTACGAGCCAATCAAGCAAATCATAGCCACCTGCATGAATGATCAGAAGGATAAGTTGTGGCCAATGTTGAAGAA
GCTTGGTGTGACGATGAAGAATGATGAGAAGGACTTGATGGGCAAGGCTCTCATGAAGCGTGTGATGCAAACTTGGCTGCCTGCCAGTCGTGCTCTGCTT
GAGATGATGATATTTCACCTTCCCTCTCCCTCAAAGGCACAGAGGTATCGTGTGGAGAACTTGTACGAGGGTCCCCTTGATGATATATATGCTAATGCTA
TCAGAAACTGGTGACCCTGATGGTCCTCTTATGCTGTATGTCTCCAAGATGATTCCAGCATCTGACAAGGGTAGGTTCTTTGCCTTTGGACGTGTTTTTG
CCGGGAGGGTTGCAACTGGTATGAAGGTCCGTATCATGGGTCCCAACTTTGTTCCTGGCCAGAAGAAGGATCTGTATGTGAAGAGTGTCCAGCGTACTGT
TATCTGGATGGGAAAGAAGCAAGAGTCTGTTGAGGATGTTCCCTGTGGTAACACTGTTGCTTTGGTTGGTTTGGATCAGTTCATCACCAAGAATGCAACC
CTGACAAATGAGAAGGAAGTTGATGCCTGCCCAATCAGGGCAATGAAGTTCTCTGTGTCCCCTGTTGTGCGTGTTGCCGTTCAGTGCAAGGTGGCATCTG
ATCTTCCTAAGCTTGTTGAGGGTTTGAAGCGGCTGGCGAAGTCTGACCCTATGGTTCTCTGTAGCATTGAAGAGTCTGGTGAGCATATCATTGCTGGAGC
TGGAGAGCTTCACCTTGAAATCTGTTTGAAGGATCTGCAGGAGGACTTCATGGGTGGTGCTGAAATTATTGTTTCCCCTCCCGTCGTCTCCTTCCGTGAG
ACTGTTCTTGAGAAGTCCTGTCGCACTGTCATGAGCAAGTCCCCCAACAAGCATAACCGTCTTTACATGGAAGCTCGCCCATTGGAGGAGGGATTGGCTG
AGGCTATTGATGATGGCCGCATTGGCCCACGTGATGATCCTAAGGTGCGCTCTAAGATCCTATCTGAGGAGTTTGGTTGGGACAAGGATCTCGCCAAGAA
GATTTGGTGCTTTGGACCTGAGACGACTGGGCCCAACATGGTTGTCGACATGTGTAAGGGAGTGCAGTATCTGAATGAAATCAAGGACTCTGTTGTGGCT
GGGTTCCAGTGGGCATCGAAGGAAGGTGCATTGGCTGAGGAGAACATGCGTGGCATCTGCTTTGAGGTCTGTGATGTTGTTCTGCACACTGATGCTATTC
ACAGGGGTGGTGGTCAGGTCATCCCAACAGCCCGGAGGGTCATTTATGCTTCTCAGCTCACTGCTAAGCCAAGGCTACTGGAGCCTGTGTACCTGGTTGA
GATCCAGGCCCCGGAGAATGCACTCGGCGGTATCTATGGTGTTCTGAATCAGAAGAGAGGGCACGTGTTTGAGGAGATGCAGAGGCCTGGTACCCCGCTG
TACAACATCAAGGCTTACCTCCCGGTCATCGAGTCGTTCGGGTTCTCAAGTACCCTCAGGGCTGCGACATCTGGCCAGGCTTTCCCCCAGTGTGTGTTCG
ACCACTGGGACATCATGTCTTCGGATCCTTTGGAGGCCGGCTCCCAGTCTGCGACCCTTGTCACGGAGATCCGCAAGCGCAAGGGTCTGAAGGAACAGAT
GACCCCTCTATCTGATTTCGAGGACAAGCTCTAAACTTTTAGTTCTGTTATCATATGGGTCTAGTTTGCTTTTGCTGCTAAGAGAGCTGCACTATTATTT
TCTGTCTGTTGAGTCGTGGCTGTATTGCTATTGGGATGTCCTATCACTTTGTTTTGATGTCTATCGATGTTAAAACTTAGATTATATATCTGTTATCCAC
TGGTAAAAAAAAAA
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