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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16261  (registered. 2007)
Contig Information
Length 1388 bp
Clones 131 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 11
Wh_SL Seed DPA30 14
Wh_dL Crown of seedling 8
Wh_e Seed DPA10 21
Wh_f Spike at flowering date 9
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 15
Wh_r Root 21
Wh_yd Spikelet at late flowering 21
Wh_yf Spikelet at early flowering 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic >gi|18978|emb|CAA42901.1| glyceraldehyde 3-phosphate dehydrogenase [Hordeum vulgare]
Score 1168
Evalue 4.74211e-176
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>Contig16261 
cgaggcgaaaagccccacaggaaaggaagagaaataagattattcAGGCAAACACAAGTACTGGACTGAACGATTTATATAATCTTCACAAAC*CACAAC
CAAAAAAGAGTACTTGATTAGCAACTCCATTACAG*AAGTACTAGTTGATGCGGAAAACAG*AAGGTAACTCATGTCCAACTAACATGAACCAGGCGTCG
TCTGGCGACACCATCCACATTTATTCTTCGCATAGACAAAGCAGGGACACC*TGACCAAAGG*AAATCA*GAACGCTCTACTGAGTCTTGGCCATGTGGC
GGATCAGATCGACAACGCGGTTGCTGTAACCCCACTCGTTGTCGTACCACGAGACGAGCTTGACGAAATGGTCGTTCAGAGCAATTCCAGCCTTGGCATC
AAAGATGCTCGACCTGCTGTCACCGACAAAGTCAGTGGAGACCAAATCTTCCTCGACATAACCCATGATCCCCTTGAGTTTTCCCTCAG*ATGCAGCCTT
TATAGCCTT*CTTGATGTCATCGTATGATGCAGCCTTCTCGGTTCTAACAGTGAGATCAACAACTGACACATCCACAGTGGGAACCCGGAAAGACATACC
GGTAAGCTTGCCATTCAGCTCAGGAAGAACCTTGCCAACAGCCTTGGCAGCACCAGTGCTGCTGGGAATGATGTTAAAGCTTGCGGCCCTGCCACCTCTC
C*AGTCCTTGCTCGAGGGACCAT*CAACGGTCTT*CTGTGTGGCAGTGATGGCATGAACAGTGGTCATCAAACCCTCAATAATACC*GAAGTTGTCATTA
ATGATCTTTGCTAGGGGAGCAAGGCAGTTAGTGGTGCAGCTAGCATTTGAGACAATGTTAA*CGTCTGAGGTGTACTTGTCCTCATTGACACCAACCACA
AA*CATAGGGGCAT*CTTTGCTTGGGGCAGAGATGACCACCTTCTTGGCACCACCCTTCAAGTGAGCAGCGGCCTTGTCCTTGTCAGTGAAGACACCGGT
GGACTCCACAACGTAATCGGCACCAGCCTCACCCccaCGGGATCTCCTCAGGGTTCCTGACGCCGAAGACGGTAACT*GGCTTCTCGCCAAAGAGCAGCG
TCTTGTCGTCCTTGAGCTTGATGTCACTGTGCTTCCAGTGGCCGTGAACGGTGTCGTACTTGAACATGTAGGTCATGTACTCGGTGGTGATAAAGGGGTC
GTTGACGGCGACGAGCTCGACATCGTCGCTCTGGAGGGCGACCCTGGCGACGAGCCTCCCGATCCTTCCGAAACCGTTGATTCCGATCTTAAT*CTTGCC
CATGGCG*AGGG*AGTGGAACTGCCGCTGCGACGCGAGACGGGGA*TGGGAGGTTGGCTGGGGACGGGACGGGAGcctcgtgccgaat
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