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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig120
Contig Information
Length 1069 bp
Tissue Shoot grown with cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whsc15f12    rwhsc15f12   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0557600 [Oryza sativa (japonica cultivar-group)] >gi|42407947|dbj|BAD09086.1| monodehydroascorbate reductase [Oryza sativa Japonica Group] >gi|113624455|dbj|BAF24400.1| Os08g0557600 [Oryza sativa (japonica cultivar-group)] >gi|215734842|dbj|BAG95564.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1353
Evalue 2.07316e-147
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig120
ATTGCCACTGGCTCCTCGACCATAAAGCTCATTGACTTTGGCGTTCAAGGAGCAGAATCAAACAACATATTGTATCTAAGGGAAATTGATGACGCCGACA
AGTTGGTCGCAGCTATGCAAGCAAAGAAGGATGGGAAGGCCGTCGTTGTTGGAGGTGGCTACATAGGACTTGAGCTCAGCGCAGCACTGAAGATCAACAA
TTTCGATGTCACTATGGTGTACCCAGAGCCGTGGTGCATGCCCCGTCTCTTCACTGCCGGCATTGCTCATTTCTACGAGGGTTACTACGCTAGCAAAGGA
ATCAATATCGTGAAGGGTACTGTGGCCAGTGGTTTTGATGCTGATGCCAATGGAGATGTTAGTGTGGTGAAGCTGAAGGATGGAAGAGTACTGGATGCGG
ACATTGTCATCGTCGGAGTCGGTGGCAGGCCGCTGACAGGCCTCTTCAAAGGCCAAGTTGAAGAGGAGAAGGGTGGACTCAAGACTGACACATTCTTCGA
AACAAGCGTCGCTGGTGTATATGCCATCGGTGATGTGGCGACTTTCCCCATGAAGCTGTACGACGAGCCGAGGAGAGTGGAGCACGTCGACCATGCTCGG
AAATCAGCCGAGCAGGCAGTAAAGGCGATCAAGGCCAAGGAGTCCGGCGAGTCCGTGGCGGAGTACGACTACCTGCCCTACTTCTACTCGAGGTCGTTCG
ACGTCGCGTGGCAGTTCTACGGCGACAACGTTGGCGAGACGGTGCTGTTCGGGGACAACGACCCAGCGGCGCCTAAGCCCAAGTTCGGCACCTACTGGGT
CAAGGACGGCAAGGTCATCGGTGTGTTCCTAGAGGGTGGCTCCGCCGACGAGAATCAGGCCATCGCCAAGGTCGCCAGGGCCCAGCCGCCGGTGGCCGAC
GTGGAGGCGCTCGGCAAGGAAGGCCTTGATTTCGCCACCAAGATCTGAAGATTCCTCTTATCTATTCTACGCGTGTAAATTTTGTGTTTGTCCCTCCCCT
GCCGATGCTTCCTAGTTCCTAGTTCAGAAGTGTGATTCGATTTTTCATTGGAGTTTGATGGTGTTGCTG
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