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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10197  (registered. 2012)
Contig Information
Length 922 bp
Clones alternative view 42 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_dL Crown of seedling 2
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlings（22℃ 16L-8D） 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 11
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462319|ref|NP_001054759.1|| Os05g0169100 [Oryza sativa (japonica cultivar-group)]
Score 428
Evalue 4.00E-118
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10197 
ACAGGACAACAACCACAGCAAAATACATTGATTATCGATTTTTTTTTTTAATGATTCAACAGGCCATTCATATTAGTACCATCATCACAAAATAGATAAT
ATCTTCCATAACAAGGTTCGACACAACATTCAGACAAAATAACATAGCACCACAGGCACTTGGAATCTAAGTTCCACACGGTAAAATAAGTTTCGATAGA
ACGGATAGACTTCTTCTGCTAGATTATGCAGCAGACAGGAAAGCTTGTCCAGGGGCACGGTTTGCAAGGCGGCCATGGCATCCGAGCAGCTTAGCGTTGA
CTCCATCAGGCAAGATCCTGCCCTCACTCTTGAACTTGAGGTAGTCATTGCGGTTGAACTTGGTGAAGCCCCACTTCCTGCTCTCAATGATCTTTTGGCG
GCCAGGGAACTTGAACTTGGCACGACGAAGGGCCTCAGTAGCATGGATGGCATTGTTGGGCTTGCACCGCACAGAAAGGAGGACCTGCCCAATGGCAACA
CGGGCACAGACTCCCTGCGGCTTCCCGAAAGCACCCCTCATACCAGTCTGGAGCCTATCAGCCCCGGCACACGAAAGCATCTTGTTGATACGGAGCACAT
GGAACGGGTGAACCCTGACCCTGAGGTGGAAGGCATCCTTTCCTGCATGCTTAGTCATGTACTTGTTGCAAGCAATACGGGCAGCCTCAAGAGCCTCACT
GGACACATTCTCCTTCTCCCATGAGACAAGGTGAACACAGTGAGAGAACTCATCGACACCCTTCTTCTTCATGCCGACATCATAGATCCTGATCTTAGGG
TCAGGCACACCACGGCAGTACCTTGACTTGGGGTATGGCTTGTTCTTGATCTGCCGATAGCACCTCGCAGGTCTTCTCCCCATGGCGACGGCGGCTCGAG
GCAGGCGGCGGCTGCGGCGGCG
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