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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4127  (registered. 2012)
Contig Information
Length 2109 bp
Clones alternative view 54 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_f Spike at flowering date 2
Wh_oh Pistil at heading date 1
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 2
Wh_KMP Shoot grown under continuous light 2
Wh_OKCS Seed DPA5 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 4
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23℃ 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 11
WH_XA Root 2
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23℃ 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|219888447|gb|ACL54598.1|| unknown [Zea mays]
Score 1121
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4127 
GCGTCCAGACACAATCTTACCGGCGACGCCTCGCGACCTCCTCAGCTCCTCTCCCCCTTCGCCGCCGCTGCCACCACGGGGACCCGCTCTGATCCCGTCA
GTTGTAGAAGTAACTGATTAGCCTGATGGCTATGGTCGATGAGCCTCTCTATCCAATTGCCGTGCTGATAGATGAGCTTAAAAATGAAGATATTCAATTG
CGCCTGAACTCCATCAGAAGACTTTCCACTATTGCACGGGCACTTGGAGAAGAAAGAACCAGGAAGGAACTGATTCCTTTCCTCAGCGAAAACAATGATG
ATGAAGATGAGGTGCTTCTTGCAATGGCTGAAGAATTGGGTGTGTTCATTCCTTATGTTGGGGGTGTAGAGCATGCTCATGTTTTGCTCCCACCATTGGA
GACATTGTCTACGGTGGAGGAAACCTGTGTCCGAGACAAAGCAGTTGAGTCGTTGTGCCGTATTGGTGCACAGATGAAAGAAAATGACATTGTTGACTAT
TTCATTGCAGTAGTAAAGAGGCTAGCGGCTGGTGAGTGGTTTACAGCTCGAGTATCATCCTGTGGTCTTTTCCATATAGCCTATCCAAGTGCCACCGATC
CGTTGAAAACAGAACTGAGGACTATTTATGGCCAGTTATGCCAAGATGACATGCCTATGGTCAGAAGGGCAGCTGCATCAAATCTTGGGAAGTTTGCTGC
CACTGTTGAACAGAGCCATTTGAAGACAGAAATCATGTCGATCTTTGATGATCTTACCCAAGATGATCAAGATTCAGTACGTTTATTGGCAGTTGAAGGC
TGTGCTGCTCTTGGAAAATTGTTAGAACCCCAAGATTGTGTAGCCCATATCCTTCCAGTCATTGTTAATTTCTCCCAGGATAAATCTTGGCGTGTCCGTT
ATATGGTTGCAAACCAGTTGTATGAGCTCTGCGAGGCAGTTGGCCCTGAGCCTACAAGAGCGGACCTGGTGCCTGCATATGTTCGCCTCCTCCGTGATAA
TGAGGCTGAAGTGCGGATAGCAGCTGCCGGAAAAGTTACTAAGTTCTGTAGGATATTAAGTCCACAGCTTGCAATTCAGCACATTCTGCCATGCGTCAAG
GAATTGTCATCAGATTCGTCTCAGCATGTTCGCTCAGCTTTGGCTTCAGTCATCATGGGAATGGCCCCTGTCTTGGGGAAGGATGCTACCATTGAACAAC
TTCTTCCTATTTTTCTTTCTTTGCTGAAGGATGAATTTCCTGATGTTCGACTCAACATAATCAGCAAGCTTGATCAAGTTAATCAGGTCATTGGAATTGA
CTTGCTGTCGCAATCTCTATTGCCGGCTATTGTAGAACTTGCGGAGGATAGGCACTGGAGGGTTCGTCTTGCAATCATTGAGTACATCCCGCTGCTGGCT
AGTCAGTTAGGTGTTGGGTTTTTTGATGACAAGCTGGGGGCACTTTGCATGCAATGGTTGGAAGATAAGGTTTTCTCGATCAGAGAAGCTGCCGCAAACA
ACTTGAAGCGCCTGGCGGAGGAGTTTGGTCCAGAGTGGGCAATGCAACATATAATTCCTCAGGTGTTGGAGAAGATAAACAACCCACATTATCTGTATCG
CATGACCATCCTGCAAGCTATCTCATTGCTAGCCCCTGTTATGGGTGCAGAAATAACATGCCAAAAGCTGCTCCCTGTCGTCATTAATTCCTCGAAGGAC
AGAGTGCCGAACATCAAGTTCAATGTTGCGAAAGTTCTGCAGTCGCTTGTACCAATCCTTGATCAATCTGTCGCTGAGAAGACTGTGAAGCCTTGCCTCG
TTGAGCTGAGCGAGGACCCTGATGTGGATGTACGATACTATGCAAACCAGGCCCTTCAGGCGTGTGACCAGATCATGATGTCTAGCTAACTAAGCTACTG
TCGTCACGTTCTTTAGAAGCTATTCTTAGTCCAGCTTGGAGTACATGTAATTTACCCTTAAGAGTCGGAGAGTTCGTTCTAGCCCAGTAATTTACCTATA
CTTCCATGCTGATAATGGATGGGCTCTGTTCCCCTTTTGTTGTTATTAATGTTGTATAATTGAGCAACGAGACACGTTGTTTCGATGGTGTGCTTAAATT
GATAGTTTG
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