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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26571  (registered. 2012)
Contig Information
Length 1239 bp
Clones alternative view 85 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_h Spike at heading date 1
Wh_r Root 6
Wh_KMP Shoot grown under continuous light 1
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 14
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XA Root 2
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 18
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|137476|sp|P23957.1|VATL_AVESA|VATL_AVESA RecName: Full=V-type proton ATPase 16 kDa proteolipid subunit;
Score 317
Evalue 3.00E-84
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26571 
AGAAAAGAGATGAACATAATATAATCATAAATTTATTATTTAGCTACAATGCGTGTTTTTATTCACCACCAGTAGGATTAAAACCCATATTCCCAGGAGC
AGCAATCCAGCCTACCCCAAAATCCTCTGCACGAACAGCAAACGCCCACCACAACCCAAAAAGAATGAAAACGGTACTGGAAGTGTCACCTTCCTTAAAA
ATCTACAAATATCTCCTTAATACATCAAAATTAGAACTTTTCAATGCTTCAGCTTCTCAAGAATGTAGCCTGTGTGGCAATTGCAGAATGGTAGAGCGAG
GCGCCTAATCCGCACGGGACTGGCCGGCACGGGACGAGAGGATGATGCCCACGATGAGACCATAAAGGGCAAGTGCTTCTGCGAAAATGAGGATAAGGAT
CATGCCCACGAACAGCTTTGGTTGTTGCGCATTAGCCCTGACTCCAGCATCACCGACAATGCCAATGGCCATGCCGGCGGCGAGCCCCGCGAGGCCACAG
GCGAGCCCGGAGGAGAGGTGAGCGTAGCCGTCGAAGAGGAAGTAGGGCTTGGCCTTGGGGTTGATCCCGGTGCTGATGATGACGGCGATGATGAGGCCGT
AGATTCCGAGCACTCCCGCCATGACGACGGGCACGATGGACTTCATGACAAGCTCCGGCCGCATGACTCCCATGGACGCCACCCCGACGCCGCTCTTGGC
CGTCCCGTAGGCCGCCCCCATGCATGAGAAGACGAGGGCGGCGGCGGCGCCGAGGAAGCCGAAGAAGGGCGCCGTCTCATCGCCGCTGAACACCGACGAC
ATCTTGCTCTCCTTCTTTCTCCGGTCGCGCTTCTTTCCTGTGGAGCTCTGGGTGGCCTCGTCGCTAAGGAAGATGGTTGGTAGGGAGAGGAACAGATGGT
CTCTCCAGTTTGCCCTCGTGCCGAATTCGGCACGAGGAGCACGAAGGTCAGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCTGGCT
TGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCC
GGGGATAACAGGCTGATACCGCCCAAGAGTTCATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGGGGCTGAAGTAGGTCCCAAG
GGTATGGCTGTTCGCCATTTAAAGTGGTACGCGAGCTGG
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