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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17555  (registered. 2012)
Contig Information
Length 1898 bp
Clones alternative view 138 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 6
Wh_r Root 6
Wh_yd Spikelet at late flowering 3
Wh_DPA20 Seed DPA20 5
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 21
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 8
WH_SP 3
WH_XA Root 6
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|129916|sp|P12783.1|PGKY_WHEAT|PGKY_WHEAT RecName: Full=Phosphoglycerate kinase, cytosolic"
Score 771
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17555 
TTTTTTTTTTGAGCATAAAACCATACACATCCACAGGGGTACGTTAAATTCCAGCCACATCACTTCACACGCACAGAGGAAGTTGATAATTATTCACGAC
TCATCTACTAGCAAAAATTGGCGACAAGCCTATCTCAAAGTTTCCTTGGGACATATAACGTTCCAGCGTTACACCGAGATGAGATCCCAAACAAAAGGGG
CACGCAGCAAGCTGATAGGTGAAACCGAATCAACCTACGCCTCGTCAAGGGCAAGAACACCAGGGAGGGGCTTGCCTTCCAGCAGCTCCAAGCTCGCGCC
ACCGCCGGTGGAAATGTGGCTCATCTTGTCGGCCAGCCCAGCCTTCTCAACAGCAGCAACGGAGTCACCTCCACCAATGATGGTCGTGACACCCTTCCCA
GTAAGCTCAGCCAACTGCTTCGCGATCGCATCAGTGCCTGCGGCAAACTTCTCAAACTCAAAGACTCCCATAGGACCGTTCCAGATAACAGTCTTGGTGG
TGTCCAAGGCTTCTGCAAAAGTCTTGATGGAATCTGGGCCAACATCCAGACCCATCCAACCATCAGGGATAGCAGTGGCAGGAACAATCTTGCTTTCGGC
ATCTGCTGCAAACTTGTCAGCCACAACGACATCAGTCGGAAGCAAGAGCTTAACACCCTTGGACTTTGCCGTTTCAATCAGTGAAGTTGCCAGTTCAAGT
TTGTCTTCCTCCACAAGAGACTTTCCAACAGCTAATCCCTGGGCCTTGTAGAATGTGAAGATCATACCACCACCAAGGATGAGGATATCAACCTTGGCCA
GCAGAGACTCGATCACACCAATCTTAGATGAGACCTTTGATCCACCAACAATGGCAGCAAATGGCTTCTTTGGGTTGGCAACAGCTCCGACAAGATAGTC
AAGTTCCTTCTGCATGAGGAAGCCAGCAACAGAAGGCCTCAAAAACTTGGTTACACCCTCAGTTGAAGCATGAGCCCTATGTGCAGTGCCGAAAGCGTCA
TTTACATAAAGGTCAGCAACTGACGCAAGCTTCTTAGCAAACTCAGGATCGTTCTTCTCTTCCTCCTTGTAGAATCTAACATTCTCTAGGAGTAGAACAC
CACCATCTGGCAAAGCAGCAGCCAATTTCTCAACTTCTTCACCGATGCAGTCAGGGGCCATCACAACTTCAAGTCCAAGGAGCTCAGACAAGCGTGCAAC
AAGAGGCTTCAAGCTGAACTTGGGGGTGACACCTTTTGGGCGGCCCAGATGGCTGGCCAGGATGACCTTGGCGCCCTTCTCGAGGAGGTACTTGATGGTG
GGGATGGAGGCGCGGATGCGGGTGTCGTCGGTGATCTTCTGGGCGTCGTCGAGCGGCACGTTGAGGTCGGCGCGCACGAACACCTTCTTCCCCTTGAGAT
CCGCCTCCCCGAGGGTGCCCACGCTCCTCTTGGTCGCCATCCCGTCGAGGAACCGGATCGAATCGGCGGCGATCTGGGCGAGGTGGTCGCTGGATTGGAG
TGGCGATGGGCTTGGCTTTGGCCTCGTGCCGAATTCGGNNCGAGGAGCTGTCGAAGTATCTGTCATGGACATTCTGTTCTTGTCACGTTGGAATACGCAA
ACCTTCACCGGATTTTTACCTTCATGCCGTGGATCATCTCAATATCGATCCAGGAAACTGCATTTTCATTGATGACAGGATGGTAAACATCGAAGCGGCC
CTTAGTGTAGGAATGGTCGGTTTGCATTTTAAAAATGCCGAGGCACTAAAGAATGATTTGTGCTCATTGGGAGTTGAATTGGCACCTCTTGTGCTTGAAG
ATGAAACTGAAGTTCAGTAACATGGCTTCCTGTTTGGTCTTCTGCTCATGTAAGATTCATGCGTATGAATAATCCTTCTGTCTCTTTATGAACTACTC
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