Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16077  (registered. 2012)
Contig Information
Length 1130 bp
Clones alternative view 71 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 2
Wh_oh Pistil at heading date 4
Wh_r Root 4
Wh_yd Spikelet at late flowering 7
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_SHC Shoot grown with cold treatment 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 4
WH_XA Root 2
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|110270498|gb|ABG57075.1|| heat shock protein 90 [Triticum aestivum]
Score 696
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig16077 
CCCTGAATTCGGCACGCGCCTCCCGCACGCTTCTCCTCCGCCTCGAGCAGCTCAGGGACGCGCGCAGCCATGGCGACGGAGACCGAGACCTTCGCCTTCC
AGGCCGAGATCAACCAGCTCCTCTCGCTCATCATCAACACCTTCTACTCCAACAAGGAGATCTTCCTCCGCGAGCTCATCTCCAACTCCTCCGATGCCTT
GGACAAGATCAGGTTCGAGAGCCTCACGGACAAGAGCAAGCTCGATGCGCAGCCCGAGCTCTTCATCCACATCATCCCCGACAAGGCGACCAGCACGCTC
ACGATCGTCGACAGCGGCATTGGCATGACCAAGTCGGACCTCGTCAACAACCTCGGGACCATCGCCAGGTCGGGGACCAAGGAGTTCATGGAGGCACTCG
CTGCCGGCGCTGACGTGTCCATGATTGGGCAGTTCGGTGTTGGGTTCTACTCCGCCTACCTCGTCGCCGAGAGGGTCGTCGTCACCACCAAGCACAACGA
CGACGAGCAGTACGTGTGGGAGTCTCAGGCCGGTGGCTCCTTCACCGTCACTCGTGATACGTCTGGGGAGCAGCTCGGCAGGGGTACCAAGATGGTGCTC
TACCTCAAGGACGACCAGATGGAATACCTTGAGGAGCGCCGCATCAAGGATCTAGTTAAGAAGCACTCTGAGTTTATCAGCTACCCCATCTCCCTGTGGA
CCGAGAAGACCACTGAGAAGGAAATTTCTGACGATGAAGATGAGGAGGAGAAGAAGGATACTGAGGAGGGCAAGGTTGAGGATGTTGATGAGGAGAAGGA
AGAGAAGGAAAAGAAGAAAAAGAAGATCAAGGAAGTCTCTCATGAGTGGAACTTGGTCAACAAGCAGAAGCCTATCTGGATGAGGAAGCCAGAGGAGATC
AACAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACCAATGACTGGGAGGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGCCAGCTTGAGTTCA
AGGCTGTCCTGTTTGTGCCCAAGAGGGCCCCCTTTGACCTCTTCGACAACAAGAAGNNNNCCAACAACATCAAGCTGTATGTGCGCCGTGTCTTCATCAT
GGACAACTGTGAGGAGTTGATCCCTGAGTA
page-top