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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig929  (registered. 2012)
Contig Information
Length 1649 bp
Clones alternative view 144 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_r Root 4
Wh_yd Spikelet at late flowering 10
Wh_CSEC Callus 7
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 8
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 1
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 8
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 5
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 15
WH_XA Root 9
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 7
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456247|ref|NP_001051724.1|| Os03g0821100 [Oryza sativa (japonica cultivar-group)]
Score 992
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig929 
CCCCGGGCTGCAGGAATTCGGCACGAGGGCNNNNNNCAGCTGCGCAAAGGCTCCACAAACCCTAACCCTAGCTCCAAGCTTAGCTTCCATCTTCTCGATC
TAGCTAGAGCCATGGCGCCGACCAAGGGCGAGGGGCCGGCCATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGGGT
CGAGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCTCGTACGTCGCCTTCACCGACTCGGAGCGCCTCATCGGCGATGCCGCCAAGAACCAGGTC
GCCATGAACCCCATCAACACCGTCTTCGATGCGAAGCGTCTTATCGGCAGAAGGTTTGCTGATGCTCCTGTCCAGAGTGATATTAAGATGTGGCCGTACA
AGGTTATTCCTGGCCCAGCAGACAAGCCTATGATTGTAGTGCAGTACAAGGGTGAGGACAAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCAT
CAAGATGCGTGAGATCGCCGAGGCTTACCTAGGAGTAACTATTAAGAATGCTGTTGTCACCGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACC
AAGGATGCCGGTGTTATTGCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAAGGCTACCAGTG
TCGGTGAGAAGAATGTGCTTATCTTTGACCTTGGTGGTGGCACTTTTGATGTCTCCCTCCTTACCATTGAGGAGGGTATTTTTGAGGTGAAGGCCACGGC
TGGTGACACTCATCTTGGTGGGGAGGACTTTGACAACCGTATGGTGAACCACTTTGTCCAAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGAAAC
CCCAGGTCTTTGAGAAGGCTCAGGACTTCTTGTGAGAGGGCGAAGAGGACCCTTTCTTCCACTGCCCAAACCACCATTGAGATCGATTCACTCTTTGAGG
GAGTTGATTTCTATTCCACCATCACCAGGGCCAGGTTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGCATGGAGCCAGTGGAGAAGTGCCTGAGGGA
TGCCAAGATGGACAAGAGCACTATCCATGATGTCGTGCTTGTTGGTGGTTCCACCAGGATCCCCAGAGTTCAGCAGCTGCTGCAGGACTTCTTCAACGGG
AAGGAGCTCTGCAAGAGCATCAACCCTGATGAAGCTGTTGCCTACGGTGCTGCCGTGCAGGCTGCAATCCTCAGCGGTGAGGGGAACGAGAAGGTGCAGG
ACCTTCTCCTCCTCGATGTGACCCCACTGTCTCTTGGTCTTGAGACTGCTGGAGGAGTCATGACTGTGCTCATCACCAGGAACACCACCATCCCCACCAA
GAAGGAGCAGGTCTTCTCCACCTACTCCGACAACCAGCCTGGTGTGCTCATCCAGGTGTTTGAGGGTGAGAGGACAAGGACCAGGGACAACAACCTGCTC
GGCAAGTTTGAGCTCTCCGGCATCCCGCCTGCACCCAGGGGTGTTCCCCAGATCACTGTCTGCTTCGACATTGATGCCAACGGTATCCTGAATGTCTCTG
CTGAGGACAAGACCACTGGCCAGAAGAACAAGATCACCATCACCAACGA
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