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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22055  (registered. 2007)
Contig Information
Length 891 bp
Clones 11 Clones [Download: TSV  ,  FASTA ]
Wh_KMP Shoot grown under continuous light 5
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VWD Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Chlorophyll a-b binding protein of LHCII type III, chloroplastic; Short=CAB; Flags: Precursor >gi|19023|emb|CAA44881.1| type III LHCII CAB precursor protein [Hordeum vulgare]
Score 1191
Evalue 9.39398e-129
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22055 
TTTTTTTTTTATTCTAATCAGTTACTCCACCATCTTCACTTGACAAAATGTAACCACCAAGAAAGAGCTAAGCACATCGCAAGATAAATATATAAGGACA
CACATCAGAAAGTGAACCAAAAAATCCTCCAAATTTCGAGATCACATCGACCATTCGTTGCTATTTGCACACACACACACACATGGGAGTAGTTTACACT
TTACAATGGCAACGTCGGCCAGCCTAAGATCCAGGCGCAAACTTGGTGGCGAAAACCCATGCATTGTTGGCGACAGGGTCGTCGAGGTGGTCGAACAGGT
TCTCCAATGGGCCCTTGCCGGTGACGATAGCTTGGACGAAGAACCCAAACATGGAGAACATGGCGAGACGGCCATTCTTGATCTCCTTCACCTTGAGCTC
AGCGAAGGTGACAGGGTCGTCGGCAAGGCCGAGCGGGTCGAAGTACTGGCCGCCGGGGTAGAGGTCGTTGCCCTCGCCGACACCGTCGAGACCATTGATG
CGGAACCCTTCGACCAGGCCCATGAGAAGGACCTGGAAGCCCAGCACGGCAAGGATGCTCTGCGCGTGGACGAGGTTGGGGTTCCCAAGGTAGTCGAGGC
CACCCTCGGAGAAGATCTGCGAGCCGGCCTTGAACCAGACGGGCTCCTTGAACTCGACGCCCACCCACTTCTGGAGCACCTCGGGGAAGACGCACCCAAG
AGCGCCGAGCATCGCCCACCGCCCGTGGATCACCTCCAGCGCCCTGTTCCTAGCGAACGCCTCCGGGTCGGCGGAAAGCCCGGCGGTGTCCCAGCCGTAG
TCGCCCGGGAACTCGCCGTTCAGGTAGGACGGCGTCTGCGCGGAGAAGGGCCCCAGGTACTTGACGCGGTCCGGGCCGTACCACAAGTCGT
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