Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9208  (registered. 2012)
Contig Information
Length 701 bp
Clones alternative view 88 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 12
Wh_f Spike at flowering date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 4
WH_XA Root 4
WH_XB Root 9
WH_XC Root, treated at 50 microM Al for 6h 7
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115466228|ref|NP_001056713.1|| Os06g0134000 [Oryza sativa (japonica cultivar-group)]
Score 232
Evalue 3.00E-59
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9208 
TTTTTTTTTTAGATGAATAGCGAACCATGTATGAACATTCAACCCAGCACACACAGCAGGGCAACGTTTTTTTTTTGACAAAAGATAACTTAGGCACTTA
GAATCACGAAGCAAAGAACCTAGTCATACAAAACCCAGTTCTCATACTAGAGAAAGTTTCAAAAACATCTTGGTACGCTGGTGTCTCTCCACCCTTGTAA
AAAAGATTTAAAGACACATATAATGGGGCAGCATAACTACTGGTCGCTGATGGTCACCTCGACCTCGACGCCGGGCTCGATGGTGATGGAGGTGATCTGC
TTGACTACGTCCGGGGAGCTGACGAGGTCGATCACCCTCTTGTGCACCCGCATCTCAAACCGATCCCAGGTGTTGGTACCTTCTCCGCAGGGGGACTTCC
TGGTGGTGATGTTGAGCACCTTGGTGGGCATCCGGACGGGGCCCTTGACCTTGAGCTGCTTCTCCTTGGCGCCCTTCACCAGATCCGAGCACACCTTCTC
GAGGTTCTTGACGGACTTGGAGGAGAGGGTGATGCGGATGCGGTGCTGCACCTCCTGGGTGCCCTCGAACCCGAGCTTCCCCGACTTCATCGGCGGCGCG
TAGGCCAGCTCCGTCGCCATGGCTGCCGGTGGCGGGCGGGGGAGGGCGAGCTAGGGTTGAGGAGGCGGCGGCGGCGGCGCTGGGGGGGTGGAGCCTCGTG
C
page-top