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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7431  (registered. 2012)
Contig Information
Length 1146 bp
Clones alternative view 141 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_dL Crown of seedling 11
Wh_h Spike at heading date 5
Wh_oh Pistil at heading date 1
Wh_r Root 5
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 4
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 7
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_SP 4
WH_XA Root 12
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 14
WH_XD Root, treated at 50 microM Al for 6h 12
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 6
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|110590379|pdb|2GO5|4|4 Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In"
Score 296
Evalue 4.00E-78
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7431 
TTTTTTTTTTGTTATGGTAAGACCAAACGCAATTTTTTTTTTAGCATCAACACAAGTCACTTCGATTGCATCAAATTCATGAAAGTGTGCAGCGATATGG
TAGGCAATGGAGCCACTAAGGCCCTTTGCTAAGTAACAACTACAAAATTCCAATAACATAAGAAACCACGACACAAGCGCCTACTGCAGGACCCTCCCTC
TGGCTTATATGATGCCGATCTTGTTGGCCACGTCAAGAGCATCGTAGTCTGGTGTCAGCTTCACGTACGCCTTCTTCTTGCCATCAGGCCTGATGAGGGT
GTTAACCTTCTTGGCCTGAATGTCATACATTTTCTTGACAGCAGCCTTTATTTTCTTCTTGTCGGCCTTGAGGTCGACAATGAAGACAAGGGTGTTGTTG
TCTTCAATCTTCTTCATCGCAGACTCAGTGGTAAGCGGGTACTTGAGGATCTGGTACTGGTCTAATTTGTTCCTTCCAGGGGTGCTGATCCTGGGGTACT
TGGGGTCCCTGGCCTTGGACAGGGTCTTGGGGCGGTGAAATGTCACAGAAGTGCGGATCTTCTTTGCCGTCTTCTTGATTGACCCAGACTTCACAGCCTT
GGCAACCTTGGCGGCCTGGGCCTTGGCATCGCCCTTCTTGGCAACAGCAACTTTGGGAGCCATTTGAGCTTCTCAGAAAAGCCTCTTGAACTTACCTTCC
TGGGGTGCGGGCGCGAGGCGATGCGAAGTCCCGACTTCTCCATTTTAAGAGGGGAAGTCTGTTTGGATAATCTTACAATTAGAGAACTCCAGGAAGCATT
TAGAGCCACATTTGGGCGCGAAACTACTGTCAAGGACAAGCTATGGCTCAAAAGACGGATTACAATGGGACTGACCAATTCCTGCGATGTTCAAAGTTCA
GGCTGTGTAGTTAAAGATTATAAAATAGTTTGCAAGGATGCCAAACACAAGCTACCTACAATTGAAGGATTACCTAAGGTTGAGGTTGAAGCTACTTCTT
TGGTTAGGTTTCAAGTATTGGGTTCTGGAAATGAGAGAGACACATCATCTTGCTCTTACTATCGGAGTGAGGACCAACAGCGATCCTCCAATAGGCTAAA
AGGAGTATCAACAGACAACGATGAATCAGAAGTCTCTTAGCGGCGC
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