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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMP_all.Contig1777
Contig Information
Length 873 bp
Tissue Shoot grown under continuous light
Clones 3 Clones [Download: CSV  ,  FASTA ]
whkp12e23    rwhkp12e23    rwhkp2a09   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0654500 [Oryza sativa (japonica cultivar-group)] >gi|5007084|gb|AAD37809.1|AF155333_1 NADP-specific isocitrate dehydrogenase [Oryza sativa] >gi|20161528|dbj|BAB90451.1| putative NADP-specific isocitrate dehydrogenase [Oryza sativa Japonica Group] >gi|55773928|dbj|BAD72316.1| putative NADP-specific isocitrate dehydrogenase [Oryza sativa Japonica Group] >gi|113533280|dbj|BAF05663.1| Os01g0654500 [Oryza sativa (japonica cultivar-group)] >gi|125527107|gb|EAY75221.1| hypothetical protein OsI_03110 [Oryza sativa Indica Group] >gi|125571425|gb|EAZ12940.1| hypothetical protein OsJ_002765 [Oryza sativa (japonica cultivar-group)] >gi|169244431|gb|ACA50489.1| NADP-specific isocitrate dehydrogenase [Oryza sativa Japonica Group] >gi|215692671|dbj|BAG88091.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1069
Evalue 1.26814e-114
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMP_all.Contig1777 
TGTGAGCCCCACTTACATAACATCAGCATCTACAGAATCGCTTGCATGTTTGACAATAATATGCGATGGTGCAGTAAAAGCTCGTTCTGTTCACAATGAA
AGCATGACAGGTAATGGCGACATAACCAAAATGACTTGAATCGATGAGTAATGACTATTCAAGCATTGAAGTGGAAGAGGTCTTTCACAGTCTTGATTTG
AGCTCAGCAGCAACAGCGTCAATGAACTCTTCAGTGTTCAGGTAATCGCTTCTTGTAACTTTTGAGGATCCATGGACAAGGAGTGCAAGGTCCTTGGTCA
TCTTCCCAGACTCCACAGTTCCGACGCACGCTTCCTCAAGTTTCTGTGCAAATTCAAGAAGTCTAGCATTCTCGTCTAGCTTTGCCCTGTGTGCAAGTCC
TCTTGTCCAAGCAAAGATTGAAGCAATGCTGTTTGTGCTGGTTTCACCACCTTTCTGGTGAACACGGAAATGGCGGGTAACTGTGCCATGGGCAGCTTCA
GCTTCGATGGTTTTACCATCAGGGCACATCAATACTGACGTCATCAAGCCCAAAGAGCCAAAACCTTGAGCTAAGAAATCACTCTGCACATCTCCGTCAT
AGTTCTTGCAAGCCCAAACATAGCCTCCTTCGCTCTTAAGTGCATAGGCAACCATGTCATCGATGAGACGATGTTCATACCATATTCCAGCAGCCTCATA
TTTGGATTTCCAGCCAGCTTCATAGATCTCCTGGAAAATGTCCTTGAACCTGCCATCATATTTCTTAAGGATTGTGTTTTTTGTGCTAAGGTACAATGGC
CATTTCTTCTCATAAGCGATTGCCATAGAAGCTTCAGCAAAACCTCGAAATTGACTCATCTGTGTTGTACATA
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