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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2115  (registered. 2012)
Contig Information
Length 919 bp
Clones alternative view 97 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 10
Wh_dL Crown of seedling 10
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 6
Wh_yd Spikelet at late flowering 2
Wh_SH - 1
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 8
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242066288|ref|XP_002454433.1|| hypothetical protein SORBIDRAFT_04g030890 [Sorghum bicolor]
Score 310
Evalue 1.00E-82
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2115 
CACGAGGCCAACTCCAGCCGCCGCCACACACTCCCCGCAGCCAATCCTCCCCAACCCAAGCTCGCAGCCATGCCTCCCAAGCTCGACCCGTCCCAGATCG
TGGAGGTGTATGTCCGCGTCACCGGCGGGGAGGTCGGCGCTGCGTCGTCCCTGGCCCCCAAGATCGGTCCGCTCGGTCTCTCCCCAAAGAAGATCGGAGA
AGACATCGCCAAGGAGACGGCCAAGGACTGGAAGGGCCTCCGCGTCACCGTCAAGCTCACCGTCCAGAATCGCCAGGCCAAGGTGTCCGTCGTCCCCTCC
GCCGCAGCCCTCGTCATCAAGGCGCTCAAGGAGCCCGAGAGGGACCGCAAGAAGGTCAAGAACATCAAGCACAGCGGCAACATCAGCCTCGACGACGTCA
TCGAGATCGCCAAGATCATGAAGGTCCGCTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTCGGCACCTGCGTCAGCGTCGGCTGCACCGT
TGACGGCAAGGACCCCAAGGATCTGCAGACGGAGATCGACGACGGCGAGGTGGAGATCCCCGCTTAAGAAGGCTTGGCTTTGGGCAGGTTGTTATGTGAG
GCTGCTGAAGTAGTTTCTCCTATCTAGATGCTTCCTGATGCATTTGAGAGAATGGATGTGATATCTTCACTTGTTCTACTCTTGCTGAAGAAGAAACTTT
TGTCATGCTTTACTGGTTCCATTGTGAGACTATTTTTTACTGGTTTAATGAGTACCTTGCGGAATCAATCAATGTTATTATGGCAGCTAGAATATCATAT
GTTGAGTTTTGTCATTGATGTTTTGAGCGATTCTTATATATTGTTAGTCGCTGCATTTGCTTTGCTGTCTTGTTGCTTAGGGCAGTTGATTGCCGCTGGA
TTATTTCATCACTAGATAC
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