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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8894  (registered. 2012)
Contig Information
Length 1234 bp
Clones alternative view 24 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_EM Dormant seed with water absorption 1
Wh_PCDAM Anther at meiosis 1
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VHS Shoot with heat shock treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XB Root 4
WH_XE Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242051042|ref|XP_002463265.1|| hypothetical protein SORBIDRAFT_02g040810 [Sorghum bicolor]
Score 614
Evalue 6.00E-174
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8894 
TTTTTTTTTTAGAAACATGTGACAGTTTTTCATAACGAATGCATCACAAATTATCCGTTCACAGGACCACGGCACATTCTTCACGGCTGACGCGCACGAC
ACCAGCGAGCATTAACAGTTGATCCAATGACTTTATTATATGTTTCCTATAATCCCTATGCTCAAATGGCCCCAGCGCCATATGATATGTCCTAGTATAT
CTCTACGCACGCCCAATCTTCTCCACCAGGCGTCTCTCGATCTCCATCCTCTTCTTCATGAGCAGCGTGTACTTCTTCAGGAGCTCCCTGCCCTCCTCCC
CCGGCGCCGGCACCGCCAGCTTTGCGCCCAGCGAGGTCTTCTCCAGGTTGCCCGTGTACATCCGGGAAATGGGAACAAAGCCTCCTTCCTCCTTGCACAG
CCACCCGTGGGCAGCTCTCAGGGCTGCGCCCAGCGAAGCCGAATCGGGTCTCTCAACTGTGAAGACGGGGCAGCCAAAGATTTGCGCGATCAACTTGAGG
ATGCTCTCATTGGAGGATGCCCCACCGGTTGCTATGATCCGCTTTGGTGGGTTGGGCATGCCAAACCGCTCGGCATGCCCTCGCATCGACAACATCTGGC
CCTCGACGATGGCACGGACCTCAGATCGTGGATCGAATTCTTGCACCTCATGCTCCGTCAGATTGTCAGATGAGGCGTCATTAAAATTCTTGACAATGTA
TCGGTGGAAACCAACTGGAAGAGGAGGCAGGATTTCATGGTCTTTGTAGTAGAATCCTAACTTCCCATCATTCAGAGGGGGTGTTTTCCCTATATAGTTG
TTGAAAACATCCCACGATTTTTCTGCGCACTGATTCCGCACATCTTCCCGGGTCAATGAACCATTTTTGTAACATAGCATCACCATGTAACCATCCGGTT
CAACAGGGTTGGGAAAAACATGGCCTTCAAGGCTTGGTTTAGCTTCGGCAGTAATCCCAAAAACTGTGTCACTAGTACCAAGGCTGATTGCAAGATCGCC
AGGTGTATTCAGTGTCAAACCTGCAAGGCTATTGGGATTGTCACCTGACCACTGAATAACCAAACAGTTCTTGTCAAACTGATGCCTTTCTACAAAATAT
GAAGAAATCCGACCTGCAGCTGCATATGCCGGTGCCAGATTTCCCAACTTCTGTTCAAGATCAGGAGCAGTAGCCTCTAAAACAGCTTTTGACCAGGTCC
TCTTGTTTATATCCATCAAATTCATCCCAGCACC
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