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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig605
Contig Information
Length 668 bp
Tissue Shoot grown with cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whsc20k21    rwhsc20k21   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)]
Score 663
Evalue 9.12865e-68
Total Hit Count 351
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig605 
GCAGCGGCGCGCACACCTCTCCCTCCTCCCTGAAGACAGCGCCGCCGTCGGCGAGAGCACAGGATGGCGACCGTGCCCGCTCCCGCAGCCGAGACCGCGG
CCTCCACGGCGCGCACGGTGAAGGATGTCAACCCCCACGAGTTCGTCAAGGCCTACTCCGCGCACCTCAAGCGCTCCGGCAAGATGGAGCTTCCGGAGTG
GGTTGACATTGTCAAGACTGCAAGGTTCAAGGAGCTTCCACCTTCTGATGCTGACTGGTACTACATCAGGGCTGCCTCGATGGCAAGGAAGATCTACCTG
AGGCAGGGAATTGGGATCGGCGGCTTCCAGAAGATCTACGGTGGCCGTCAGAGGAATGGTTCACGCCCACCGCACTTCTGCAAGAGCAGTGGTGCTGTGT
CCCGCAACATCCTCCAGGAGTTGCAGAAGATGGGCATCATTGATGTGGACCCCAAGGGTGGAAGGCTCATCACCTCCCAGGGAAGGCGTGATCTGGACCA
GGTTGCAGGAACTGTTCCTGCCGAATTCTGATCAGTTGAAGTCCCCTCTATGCAATCGTGTTCGGTAGTAGAATTTGGCTACAGTTTTGAATTATGATAC
CCCCCTGTGTTTGTTATCCAAGACTTCGTTGAAGTAGATCGCATGCTATTCTGGTACAATGGTTATGT
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