Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25422  (registered. 2007)
Contig Information
Length 1232 bp
Clones 645 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 16
Wh_EM Dormant seed with water absorption 1
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 155
Wh_KMV Shoot grown with continuous light after cold treatment 126
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 3
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 42
Wh_V4816 Shoot grown under cold condition for 16days 95
Wh_V483 Shoot grown under cold condition for 3days 34
Wh_VABA Shoot with ABA treatment 71
Wh_VHS Shoot with heat shock treatment 17
Wh_VWD Shoot grown with dessication 63
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum] >gi|31087833|gb|AAN27951.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum] >gi|31087835|gb|AAN27952.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum] >gi|31087837|gb|AAN27953.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum] >gi|31087839|gb|AAN27954.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum] >gi|31087841|gb|AAN27955.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hordeum marinum subsp. marinum]
Score 1044
Evalue 1.12475e-153
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25422 
CGAGGGAGAGAACTAGTCTCGAGTTTTTTTTTTCTCTTTTTATTTCGTTTCTTTTTTATTTATACCTTCTCTTCTTTATCTTTAGTTTTATCTACTTATC
AATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTC
ATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCGATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGA
TGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCG
GTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAA
AGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGC
ATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTG
CGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCCA
GTCGCATTCAAGTAATGCCCCTTGATTTCACCGGGTTTCCGGCCCTGTGATTTATAAATAGCCTTCGGGCACAAAAGACAAAACGGTCTCTCCAGCGCAT
AAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGGATAATCC
CAATTTTGGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATGTCACCAACACGGTAGCCCTCGATGAAGCCCATGAGCACCACC
TGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTAGTCGAGGCCGCCCTCGGAGAAGATCTGGGCGCCGGCCTTGA
ACCACCATCGGCCTCGCCGAACTTGATGCCGT
page-top