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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12862  (registered. 2012)
Contig Information
Length 762 bp
Clones alternative view 85 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_f Spike at flowering date 1
Wh_SH - 2
Wh_CSEC Callus 4
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 8
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XB Root 6
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|55296571|dbj|BAD69095.1|| putative nitrate-induced NOI protein [Oryza sativa Japonica Group]
Score 154
Evalue 1.00E-35
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig12862 
TTTCCCCCGTCTCGAGGTATAAATCCGTCAATCGACTGCTGCTCCTTTTCCACTTCGATTCGCCGTCTCCTCCTCCCCCTTCCCCTCCGTCTCGCTCCTC
GCCCTTATCCCCGTCCCTTTCCCCTTCCTCCCACCCGCAGCCGACGAAACTTTCCCCAAGCCCCTCGGTGGATCGGACCGCCGCGCTCCATCCATGTCGG
AGGAATCTGGTCGCCCTTTGCCCAAGTTTGGCGAATGGGACGTCAACGACCCAGCTTCTGCTGATGGGTTCACTGTTATATTCAACAAAGCCAGGGATGA
GAAAAAGGCTGGGAATGGACAAGATACTGAATCCCCTGGCAAAGATGCCAGGACTGAGAGGGTGGAATCTTATGCCACCAAGGCAAATTCAAAGAAGTGG
TTTTGCTGCGTGACACCAAGTCCTACACAATCTTGAGGAGGACAAGCGTCGCCCGAAGAAAAAATGGTTGCCGAAGTATGGTCGTTTAATTTTGCTATAT
ACATACTATCCATAAGACCTTGTAAGAGGTACCCAGGCTCCCTGGGCCATCACGATGGGTATCTCGTAAAAGATGGGTATCTCGTAAAACTCTGAAGTGT
GTGTATGTATGGTGTGAGGGTTGTCAGACACTCAGTTTGGATAAGTGAACTTCTGATTGTAAAAAAAAAATTCCTTGTCGGTCTCGTTTTGTGTAGTAGT
AGTGGTGAAGTTGATATGTGATTTGAGTCTCGCCTATTGCCAGAACTGCAAACATCCAAAAT
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