Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9057  (registered. 2012)
Contig Information
Length 2077 bp
Clones alternative view 331 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 1
Wh_r Root 5
Wh_yd Spikelet at late flowering 10
Wh_CSEC Callus 8
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 8
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 7
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 15
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 9
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_CA 1
WH_SP 12
WH_XA Root 30
WH_XB Root 41
WH_XC Root, treated at 50 microM Al for 6h 38
WH_XD Root, treated at 50 microM Al for 6h 26
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 17
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|90289596|gb|ABD92930.1|| alpha tubulin-2A [Triticum aestivum]
Score 920
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9057 
CTTGGCAGCTCGCCTCAGATCAGAGGGCCGAGTGCATGACTGACCTTGAAACATATATCTCGATTTACAAACCGTGGATACTTATATCTCGATTTACACA
CCATTCATTCACGGATAGCCAAGATGGGAAGGAATAAAAATGGAGAAGCAGAAAAAAAATGTGCTGTTAGACAATCAGTTTGGCCCCCAGCAAACGATGT
GGTACGCCTTGTGCAGCTTCTCCTCCTCGGACCGCCTTGGCCGGGCAGCCCTGCCTACGGCGGCCTGGGAGGAGGAGGAGGAGGAGAGGGACGCCGGGAC
GGCGCGGCGGCCGGTGACGACGGCGCGGTGGTAGAGTGAGCGGAGCGCGTAGTCCCAGCGGCACAGCCCCGCCTGGTCCTTGAGCGCCTCCACCCTCGTG
CCGAATTCGGCACGAGGAAAGGCGTCTTCGTACTCGCCTCTCTCCGCGCAACCGAGCCTTCCGCCCACCTCCTCCCCATTTCGCCAGCGGCGCACCCACC
AACCACCCCCACCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGCCAGGCCGGCATCCAGGTCGGGAACGCGTGCTGGGAGCTCTACTGCCTCGA
GCATGGCATTCAGCCTGATGGCCAGATGCCCGGTGACAAGACCGTTGGGGGAGGTGATGATGCTTTCAACACCTTCTTCAGCGAGACTGGGGCTGGGAAG
CACGTCCCCCGTGCTGTCTTCGTAGATCTCGAGCCCACTGTGATTGATGAGGTGAGGACTGGCGCTTACCGCCAGCTCTTCCACCCTGAGCAGCTTATCA
GTGGCAAGGAGGATGCAGCCAACAACTTCGCCCGTGGTCATTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGTATCAGGAAGCTTTCAGA
CAACTGCACTGGTCTCCAGGGATTCCTTGTCTTCAACGCTGTTGGAGGTGGAACTGGCTCTGGCCTTGGTTCTCTTCTGCTGGAGCGCCTCTCTGTTGAC
TATGGAAAGAAGTCCAAGCTTGGGTTCACAGTGTACCCATCACCCCAGGTCTCCACCTCTGTTGTTGAGCCATACAACAGTGTCCTGTCCACCCACTCCC
TCCTTGAGCACACTGATGTGTCTATCCTTCTTGACAATGAGGCCATCTATGACATCTGCCGCCGCTCCCTTGACATTGAGCGCCCAACATACACCAACCT
CAACAGGCTTGTTTCTCAGGTCATTTCATCGCTGACAGCTTCCCTGAGGTTTGATGGTGCTCTGAATGTTGATGTCAATGAATTCCAGACCAACTTGGTG
CCCTACCCGAGGATCCACTTCATGCTTTCCTCCTATGCCCCAGTGATCTCAGCTGAGAAGGCCTACCATGAGCAGCTGTCTGTTGCTGAGATCACCAACA
GCGCCTTTGAGCCTTCATCTATGATGGCCAAGTGTGACCCCCGCCACGGCAAGTACATGGCCTGCTGTCTCATGTACCGTGGTGATGTTGTTCCCAAGGA
TGTCAACGCTGCTGTGGCCACCATCAAGACCAAGCGCACTATCCAGTTTGTTGACTGGTGCCCCACTGGCTTCAAGTGTGGTATCAACTACCAGCCACCA
GGTGTTGTCCCAGGCGGTGACCTTGCCAAGGTCCAGAGGGCTGTGTGCATGATCTCCAACTCCACCAGTGTCGTCGAGGTCTTCTCCCGCATTGACCACA
AGTTTGACCTCATGTACGCCAAGCGTGCCTTCGTCCACTGGTACGTGGGTGAGGGCATGGAGGAGGGAGAGTTCTCTGAGGCCCGTGAGGATCTTGCTGC
CCTGGAGAAGGACTATGAAGAAGTTGGTGCTGAGTTCGACGAGGGTGAGGACGGTGACGAGGGCGACGAGTACTAGAGCCTGCCTCCTGGTGCTTTCCCA
AGGCGTGCTGCTGCTATCCCATGATCTGCCCGAGTGGCTTTATCTGTTATCTGTCTGTTTGAATCTTTGCTTTGTGGTGTTTGTTTTATAACCTGTTGTG
TTGTAAGACCCTTGTATCTTTGAACCTGTTATGCACCTTGGTTAATATGCATGCTATCTGGTTATCTAAAAAAAAAA
page-top