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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8149  (registered. 2012)
Contig Information
Length 690 bp
Clones alternative view 117 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 13
Wh_dL Crown of seedling 8
Wh_h Spike at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 4
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 3
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 5
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_CA 1
WH_SP 1
WH_XA Root 11
WH_XB Root 22
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 8
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|110816408|sp|Q5I7K9.2|RL30_WHEAT|RL30_WHEAT RecName: Full=60S ribosomal protein L30
Score 223
Evalue 1.00E-56
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8149 
TTTTTTTTTTAGAAAATGATTCATGTGAATAGAATCATAGATTTGTGTGAATCAAAAAACACTTAGCAAACAACAGCAAGATGGAAACAACGATATCATG
AAAACAAAACCACATGAATGTCCAGCAGAACAACCATATGAAGTATTATCTGTATGACAGCTCCAACTCAGCGTCGCAAAAAGGTACACAAACCGAAGAT
AACAAGAGTGGTTCCAAGAGCACAACAGGACCCTACAACTCGACTAAATAAAATAGGTAGAAAGCTCTCTTCTCTTCACTGGGTGGTGGTGGTGGTGCTG
ATGATGTCCGAGTCACCAGGGTCAAGGATGCTGAGGCAGCACACCCGGTAGTACTTGCCGCAGGCAGTTCCAAGATCAACATTGTTTCCGTGGAAGTGGT
GCACGCTAATTTTCGCCAACATAGCGTAGTACTCAATCTCTGACTTCCTAAGGGGAGGGCAGTTGTTCGCGAGGATGATCAGCTTCCCCTTGGAGCTGCG
CAGCGTCTTGAGGACGGTCTTGTAGCCGAGCGTGTACTTGCCGCTCTTCATCACCAGCTGCAGCTTGTTGTTGATGTTCTCCCCGCTCTTCTTCGCCTTC
TTGGTGGGAGCCATCGCGTCGGGCGAGCGAGCGTGGGGAAGGGGGTGCGGATGGCTTCGGGGGAGCCGAATTCGGCACGAGGCCTCGTGC
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