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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8685  (registered. 2012)
Contig Information
Length 1703 bp
Clones alternative view 439 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_dL Crown of seedling 16
Wh_e Seed DPA10 8
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 19
Wh_oh Pistil at heading date 7
Wh_r Root 27
Wh_yd Spikelet at late flowering 14
Wh_CSEC Callus 11
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 8
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 13
Wh_MS Seed DPA5 of DT3DL CS wheat 10
Wh_OKCS Seed DPA5 15
Wh_PCDAM Anther at meiosis 11
Wh_RDr Root of dessiccated seed 7
Wh_SHC Shoot grown with cold treatment 12
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 8
Wh_VSCB Liquid cultured tissue 7
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 9
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 8
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 12
WH_XT Roots, 18 day old plants were grown hydroponically 13
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_CA 3
WH_SP 43
WH_XA Root 19
WH_XB Root 27
WH_XC Root, treated at 50 microM Al for 6h 19
WH_XD Root, treated at 50 microM Al for 6h 17
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 8
WH_XV Leaves, plant was grown at constant 23Ž 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|90289596|gb|ABD92930.1|| alpha tubulin-2A [Triticum aestivum]
Score 920
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8685 
TTTTTTTTTTAGATAACCAGATAGCATGCATATTAACCAAGGTGCAAAGCAGGTTCAAAGATACAAGGTTCTTACAACACAACAGGTTGTAAAACAAACA
CCACAAAGCAAACGTTCAAACAGACAGATAACAGATAAAGCCACTCGGGCAGATCATAGGATAGCAGTAGCAAGCCTTGGGAAAGCACCAGGAGGCAGGC
TTAATACTCATCGCCCTCATCACCGTCCTCACCCTCGTCGAACTCAGCACCAACTTCTTCATAGTCCTTCTCCAGGGCAGCGAGATCCTCACGGGCCTCA
GAGAACTCTCCCTCCTCCATGCCCTCACCGACGTACCAGTGGACGAAGGCACGCTTGGCGTACATCAGGTCAAACTTGTGGTCGATGCGGGAGAAGACCT
CGACGACACTGGTGGAGTTGGAGATCATGCACACAGCCCTCTGGACCTTGGCAAGGTCACCGCCTGGGACGACACCTGGTGGCTGGTAGTTGATACCACA
CTTGAAGCCAGTGGGGCACCAGTCAACAAACTGAATAGTGCGCTTGGTCTTGATGGTGGCCACAGCAGCGTTGACGTCCTTTGGCACAACATCACCACGG
TACATGAGACAGCAGGCCATGTACTTGCCGTGGCGGGGGTCGCACTTGGCCATCATGGACGAAGGCTCAAAGGCGCTGTTGGTGATCTCAGCAACGGACA
GCTGCTCATGGTAAGCCTTCTCAGCTGAGATCACTGGGGCATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAATTCATT
GACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCTGTCAGTGATGAAATGACCTGAGAAACAAGCCTGTTGAGGTTGGTGTATGTTGGGCGCTCA
ATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGAAGGATAGAGACATCAGTGTGCTCAAGGAGTGAGTGGGTGGACAGGACACTGT
TGTATGGCTCAACAACAGAGGTGGAGACCTGGGGAGATGGGTACACCGTGAACCCAAGCTTGGACTTCTTTCCATAGTCAACAGAGAGGCGCTCCAGGAG
AAGCGAGCCAAGGCCAGAGCCAGTTCCACCTCCAACAGCGTTGAATACAAGGAATCCCTGGAGACCAGTGCAGTTGTCTGAAAGCTTCCTGATACGGTCA
AGGCACAGATCAACAATCTCCTTGCCAATGGTGTAATGACCACGGGCGAAGTTGTTGGCTGCATCCTCCTTGCCACTGATAAGCTGCTCAGGGTGGAAGA
GCTGGCGGTAAGCACCAGTCCTCACCTCATCAATCACAGTGGGCTCGAGATCTACAAAGACAGCACGGGGGACATGCTTCCCAGCACCAGTCTCGCTGAA
GAAGGTGTTGAAAGCATCATCACCTCCCCCAACGGTCTTGTCACCGGGCATCTGGCCATCAGGCTGAATGCCATGCTCGAGGCAGTAGAGCTCCCAGCAC
GCGTTCCCGACCTGGATGCCGGCCTGGCCGATGTGGATCGAGATGCACTCCCTCATGGCGGCGGGTGGGGGTGGTTGGTGGGCTGCGCCGCTGGCGAAAT
GGGGAAGGAGGAGGGCGAAGGCTAGGATGCGCGGAGAGAGGCGAGTACGAAGACGCCTCCCGTCTCCGCCGCACCGCGCCCAACGAATCCTAGGTAGGGT
TCG
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