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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11512  (registered. 2012)
Contig Information
Length 1090 bp
Clones alternative view 32 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_EM Dormant seed with water absorption 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XE Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218194009|gb|EEC76436.1|| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Score 398
Evalue 5.00E-109
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11512 
GATATATATCTATACCCCCATTGTTCCTGCTCCGGTAATTCGGGGCACCAAATGTCTTAGGAGGACAAACATGTACCTAAAAGGAAACATGATAATGCTC
TGAAACTGTAGTAAGTCTGACTGACAAACAATGGTCTCTACCAAAAATTTGCAACTACACACGGTATCTACCAAGGATAATTTCTTTCTAGCAGTATGAA
CTTTAATACAACCCCACCAGAATTACAGGCCAAAAGGAGTCAAAAGGGACCGAACTAACACCTAGACACCTAGGGCGCCGTAAGATCCATGTGAGCATCC
TTTTGCAGAATCACCACTTCTCTGTTCGCACCTAGGTAGAACAGCACCCTTTCTTTGTGTTGCCAGATGAATCGGCAACATTGATGGTGGTTCCTTGAGT
CGGAGGTCCACTTCCTGCAGCCTCCTGGGCAGCGAGCGCCTTCTTGCTTATGATCTGATGGATGTCGGAAAGGATAGTCTGAAACGCCTTCTCGACGTTC
AAGGCTTCCAGTGCCGAGGTCTCAAGGAAGGATAGCCCTTCCTTCTCTGCTAATGCCTGCCCTTCTTCCTCTTGAACTGACCTCAGGTGGTTAAGGTCGG
ATTTGTTTCCAACCATCATGATGACAATGTTGGAGTCAGCATGGTTACGGAGCTCACTAAGCCACCTATTGATGTTTTCAAATGATAGCTTCTTTGTTAT
GTCATACACCAAAAGAGCTCCCACAGCTCCCCTGTAGTAAGCACTTGTGATTGCACGGTACCTCTCTTGGCCAGCAGTATCCCATATCTGAGCTTTAATG
GTCTTGCCTTCTACCTGGAGGGTGCGGGTGGCGAACTCGACGCCGATGGTGGACTTGGACTCGAGGCAGAACTCGTTGCGGGTGAAGCGGGAGAGGATGT
TGGACTTGCCGACGCCGGAGTCGCCGATGAGCACGATCTTGAAGAGGTAGTCGTACTCGTTGTCCACCCGGTGCGCCATGTGGCTCCGCCGCCGCCCGCC
GACGCGGATCCTGGGATTCGATTCGGTTGCGGATTCGCCGGTGGGGGAGGGAGGGCGCGCCGGAGAGGGGAGGGGGGGAGGAGGTGGGTG
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