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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig20376  (registered. 2007)
Contig Information
Length 1599 bp
Clones 8 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 1
Wh_EMC Dormant seed with cold treatment after water absorption 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0697200 [Oryza sativa (japonica cultivar-group)] >gi|41052947|dbj|BAD07857.1| unknown protein [Oryza sativa Japonica Group] >gi|41053211|dbj|BAD08173.1| unknown protein [Oryza sativa Japonica Group] >gi|113537348|dbj|BAF09731.1| Os02g0697200 [Oryza sativa (japonica cultivar-group)] >gi|215736894|dbj|BAG95823.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215765307|dbj|BAG87004.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218191406|gb|EEC73833.1| hypothetical protein OsI_08567 [Oryza sativa Indica Group]
Score 1102
Evalue 4.61515e-118
Total Hit Count 105
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig20376 
TCAGATTGGAAGCTGCCAGTGCAGGCGCTGATGAAAGCTATGCACATGGTACAAACCGCTACCTGAAGAAAGTAGTTTACACCTTACAATTTTCATTACA
CTGGAGAACTGGATTAAGCTAATATATATTGATACTGGGTAGTATTTCACAAATTTTGAGCGACAAGGTCATGAACGCGTCATCTTTACCCACTTGGAAC
TTAGTTGAATAGGCAGGCAACAATTCCTGCCAATCTGAAGGGATTGAGCTAATCCTTACCTATCCAGACAAGCATTTACTGCAAATTACAGCAAATTCAT
ATTCATATGTAAGAATACCCTAACACTTGCTTGAAAAAGTACTGGCTGGCATAAAACAGTGGTTGCAGAATTCCATCAGCATGTTCAGTTACATCATAAT
TTGAGTGCATATTTCAGTTCTTCCCGAAGTGAAAGGGATCCTTGGTGAGCCACTATATGGCTTTTGGCACTCAATTTTCTCGGGGATTTTTCATCGATTG
CTGCATGAGGTACCTGCCAGTGTAGAACCCTGCTGTATACCATGCATTCAGTACGACAGCGAGATCACTGTTTGCTCCTGTGGTGTCTAAATTCAGGTTC
ATGCCCACAGTTGTGTTATTCTCCTTTCCAATTCCACCTTCATTTCTCATATTTGGAAAGGAGGCAGCATCTCCAGATATTGTATTTCTCATGAAATTCA
TGGCACCTTCAGCAGTCATCATTGCAGCCTTAGCAACTTGATCATCGCCAGTAGATACCTTAGTTGGGAGCTGCGTAAAGGCTGAACCAGTAGGATATGT
AGTGCTTGCTCCAGGGCAATGATCACAAGTGAATGATATGCTGCAGCCTCCATTAGGTGGCATACCAGTGGATTCGCCACTTTGTTGACCAGTTGAACAG
CAGGAGATTGAAACCATGGGAACATTCAAGGAGCAGCATGAGGTTTGAGTGGTTGAAGAGTTTGGGTCTGGTGCTGTGGCAATGTAAGCAGGAACTTGCT
GCTGTTGATATGCTGAAGATTGTTCAGGGGTTTGATAATTCCAATAATTTGTCTGATGTAATTGCTCAAGAACTTTCTGGCTTTGCACCTCAAGTTCATA
GTACTTCCTCAGTAATTCATTGTAGTCCTCTGTCTGCTGGTTTGAACTATCCTTTCCCTCGGTATTGGTGACATCTGAGAAGCATGTCTTAGATTCAGAG
ATCTTTGTCTCTTTGCCCAGATCAGTTTCTTGAAGAGGAGCTTGCTTATCGGTATTTCTTTCCTCACAGGGCTGCTGTGGTGTCTCCACTGGACCAATGG
GTAAGTTAGTGCAGCTGTCATTTTTCTCTGTTTGCTCATCTGCCACTTCAGTAGAGACAGGTTCTTCTGCAACAGCAGCGGCAGCGTACGCGGCAGCAGC
AGCTACATCTTCTGACTCTTGTTTCTCAGATGGAGCACCTTGGTTGTTCTTGCCATGCATTGCCTTGTAGGTGGCGACGGCGTGGTCGAAGGCGTCCACC
AGCGCCGAGTCGTCCCACAGCTCGCCGCCCTTCCCCATCTCCTCTCTCGCCAAGTTCTCACGGCTTCCTCCTCCGACCAGCTGCGCCTCCCCCGAGCGC
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