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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4011  (registered. 2012)
Contig Information
Length 1951 bp
Clones alternative view 436 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 8
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 7
Wh_h Spike at heading date 10
Wh_oh Pistil at heading date 1
Wh_r Root 6
Wh_yd Spikelet at late flowering 4
Wh_SH - 2
Wh_CSEC Callus 42
Wh_DPA20 Seed DPA20 8
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 9
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 3
Wh_KMP Shoot grown under continuous light 8
Wh_KMV Shoot grown with continuous light after cold treatment 5
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 19
Wh_PCDAM Anther at meiosis 5
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 10
Wh_SHDr Shoot grown with dessication 9
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 9
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 8
Wh_VWD Shoot grown with dessication 13
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 12
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 15
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 10
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 20
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 12
WH_XR Roots, 18 day old plants were grown hydroponically 13
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 17
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_SP 6
WH_XA Root 7
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 5
WH_XF Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 17
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 12
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|290894667|gb|ADD70015.1|| S-adenosyl-L-methionine decarboxylase 2 [Leymus chinensis]
Score 764
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4011 
TACAGGCAGAAAGGAATTCAGTAGTAATAACAAAGTGATTTTTTTTTTAGAAAAAAAATGCTTATTTATAAGTTGAGACAACTTTTCCCCAAACAGTATG
CTCATTGTGGCAGACGCAGCAAACCACCTAGAGCTAATAGTTTATTCAGAGAGCAATAGCCTGGCCGGCTGCTTCACAGTAACCAAACGACAAAAGACAT
ACAGTCAGAGCAAATTCCACAGACTGAACATTCGACAGCAAATCACTCGCACAGCACCACGCCCTCCTCCAGAGAATCCTCCGCTCGCCATGCGAGGAGG
TTGGCGAGCTTGCCTTCCTTGACCAGCGGGTGGCTCTCCACAGTCTCGGCCTCGAAGCAGTGGAAGACGGACCTGGGCGACCCGGCAGAGACAGCAACCT
CTTCGTTCGCGGCAAAGCTCTGGTAGATGAGGACGCCTCCACAGGGGAGCTCCTGCTCCACAACGTTGTTGCAGTCGTATGCCTCGGCGTCGAGCTTCTT
GCCCCAGGTGGCGGCATGGCCGCGGCCACCGAAGATGGTGACCGCCACTGAGAACTCTGAAGGGCCAAAGCACCGGAGGACCCTCTTGACGATGTCGCCA
TAGGCCAGGGCCGAAGCGTCCATGCCCATGACCTCGTAGCTCGCGTAACTGAAGCCGTCCTCGGGGGTCACATGGATGGTGGAGAAGGCAGATCCGTTGA
TGGCGTTCATGGAGTAGCCGCAGGGCTCGAAGTCGAAGTCGCAGACCTCCATCTCAGGGATGATGTCAGAGATACCAGAGAGCTTGGTCATCTCCTTAGC
ACAGGAGACATGGCCATCAGCAGAAGTCTTGAAGAACACAGAGGCCTTCTTCTTGTCGAGCCCAGTCATGCACATCTCCAGGGTGACCATGGGCTGCTCA
GGTTGCTCGGTGGCATAGTAGATGTGCCACTTCTGGCCAGGCTTCGCTGGGTCTCCAATCACATAGGCATTGCCACCAGACTTCAGGTGGCCAAAGTAGC
GGTTCAGGACATCAACCTCCTCAGAGAAGCTCCTGTGGGGAGCAGGCTGTGCACCGGGGAAGATGAACATCCCACGGGAGTACTTCACAGCAGCAAGCGA
CATGCACAGCTCTTCAGCCAGCTCGAGAATCCTTGGAATGGTGAGCAGGAGCATGGTAGTCCCACAGGTCTTGATCACAATCTTCTGAGAGTAGATAAAC
AAGCTCGACTCGGATAGCACGTACGAGTCAAAGTCCTTGTTGGAGAGCTCGGACACAATGGTGCACCGTGCAAGATCAAGAACAGAGTCAATCTGGGCCC
TGGAGAGGGCGCGCAGGCCACGACCATGAGGGTCAGCAAAGATTGATGCCTCAGAGAAGGTGATATCAAGGCGCTTCTCGTAGCCCTCAAATCCGATCGC
AGAGGTCGGGGCAGCCATTGTTGCAGTTTTGAGTCAGAAAGCAGAGCAGAGAGGAACAGAGGGAGAAAGACTAGAGAACTGGTCGATTATCGTGAAGCAG
CAAGCCAGAGAGATTGGTGGGAGAAAAGAGTCAGAATAAAATTGCATAAAAATCCTAAACTACGGGAAGGGGATGCCAAAAACGATATCAGGATGGCTTC
TTCGCGCAGTTCGAGTATGCAGCAGAGAACTTCTTGGCGCCTCCAGCAGGTCGAACGTCTTCAATGCTGTAGCCGAGGGGAGCTTCGTACATCAGGGAAC
TACTACTGCTAGACTTTTTGCCACCCTTTGACTCCATTAGCACATTCACTAAAGGTTCCTGGGAAAAATTGTATGGTAACCCCGATCCCGAGCGCGCCCG
CTTGTTCCGATTCCGACCTCAAGAATTCCCCTCTCCGAACACAGATCTCGAGCCCTCCCGACGAGTTCTTCTCTCTCTTTTTTTCTCTTATCTAGCTGCG
GTGGTGACGGCGGCGAGACGGCGAGGGTGGGAGGAATTCTTGTGCAACCCT
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