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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9854  (registered. 2012)
Contig Information
Length 909 bp
Clones alternative view 71 Clones [Download: TSV  ,  FASTA ]
Wh_oh Pistil at heading date 1
Wh_r Root 6
Wh_yd Spikelet at late flowering 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|585032|sp|P38076.1|CYSK_WHEAT|CYSK_WHEAT RecName: Full=Cysteine synthase; AltName: Full=O-acetylserine
Score 550
Evalue 6.00E-155
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9854 
CCAGCTCCGGCTCCAGAAGGATCACTTCGCTGTCAAATCGCTCGTCGACGGCGGGATGGGGGAGGCGTCATCTCCGGCGATCGCCAAGGATGTCACCGAG
CTGATCGGGAACACGCCGCTGGTGTACCTCAACAAGGTGACCGACGGGTGCGTGGGGCGCGTCGCCGCCAAGCTCGAGTCCATGGAGCCCTGCTCCAGCG
TCAAGGACAGGATTGGATACAGCATGATCACCGACGCGGAGGAGAAGGGGTTCATCGTCCCAGGCAAGAGTGTCCTGATTGAGCCAACCAGTGGCAACAC
AGGCATTGGGCTGGCCTTCATGGCTGCTGCCAAGGGTTACAGACTTGTACTCACAATGCCCGCATCCATGAGTATGGAGAGGAGAATCATCTTGAAGGCT
TTTGGTGCTGAGCTGGTCCTCACCGACCCACTCTTGGGAATGAAAGGAGCTGTCCAAAAGGCGGAAGAGCTGGCAGCAAAGACACCTAACTCATACATCC
TTCAGCAGTTCGAGAATGCTGCCAACCCAAAGATTCACTATGAGACAACTGGGCCTGAAATCTGGAAAGGCACAGGAGGAAAGATCGATGGCCTTGTTTC
TGGCATCGGGACAGGTGGTACCATTACTGGATCTGGAAAATACCTCAAAGAGCAAAATCCTAACATCAAGCTCTACGGTGTGGAGCCTACCGAGAGTGCT
GTCTTAAATGGTGGAAAGCCTGGACCACACAAGATCCAAGGAATTGGAGCTGGTTTTATCCCTGGTGTCTTGGATGTTGACATCATTGATGAAACCATAC
AGGTTTCAAGTGATGAGTCCATTGAGATGGCAAAGTCTCTGGCATTGAAAGAAGGATTGCTGGTTGGAATCTCTTCTGGTGCTGCTGCAGCAGCTGCAAT
CAAGGTTGC
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