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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig19505  (registered. 2012)
Contig Information
Length 1105 bp
Clones alternative view 461 Clones [Download: TSV  ,  FASTA ]
Wh_yd Spikelet at late flowering 2
Wh_SH - 7
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 14
Wh_V4816 Shoot grown under cold condition for 16days 8
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 36
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 12
WH_XN Leaves, plant was grown at constant 23Ž 81
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 17
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 64
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 12
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 25
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 88
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 33
WH_XV Leaves, plant was grown at constant 23Ž 15
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 14
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|47847750|dbj|BAD21528.1|| putative brown planthopper-induced resistance protein 1 [Oryza sativa
Score 295
Evalue 7.00E-78
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig19505 
AACTGTTGTACTGCTTCTGTAAACCGTATGCTATACCATCATTGTCTATGAACACGCGTGGCTGCACCTAATTAAATTTCATGATCAATTTAGGCAAGTC
CTTTTTCAAAGCATATTGCCTCCATTCTTCTGATACATTATTATGATTTTTAGTCAATCTTACTGTGGAATGTGGAAGTCATTGCTCATGGAAACATTTT
TCATGCGCAGATACCAGATACGGTACATAACAGACCAGAAGCTTCCGGGCGTGCTTCTTTACAAGGAAAAGCTCTCCTAAAAGTTCCCAGGCTTATTTTT
GCGATACAGGCTACAACACTTTTACAGACTATAGATCTGCCTGCTACTCAAAAGCACCGCGGACACACATATTTACAGATCCACAAGTACCGGGCATGGA
CTCCTGCATCTCTAAAACTTCAGCATGGCCTCCAACGCGCGAAGAACGTCGTCGCGGGTAACTATACCTATTACTTGATTGTCCTGGTTTACTATCGGTA
ATCTGTGGATCTTCTTCTTGAGCATCAGAGCTGCGGCATCGGTCACTGTTTTATCGCATGATAGCGTGATTGCTGGAGATGTCATCACATCTGCAATCTT
CGTCTTTGGCCCATGTGAAGCCCTCGCGCAATCGCTCTTCACGACGACCCCGACGCATCTGCGAGCGCTGTCGACAACCGGGAGGCCTGACACGAGCTGA
AAGTGGCCTTCAACCTCCACCAGCGCCTGCTCCGCTGTGACCATCAGCACGGGCGTCGACATGGCCTCGCGCAGGAGCGGCCCCCGCTGCTGATCGGCAG
CGTGGGAAGGTGGCTGCTGCTGCTGCTGCTGCTGGGACTGGAGGTAGGCGCGGAGGTCGTCGTAGCTGAGGAGGGAGAAGTTCTCGGGCCACTCGCCGGA
GATGATGGCGTCGGGGTTCTCGTCGAGCCCGAGCCGGAGCCCGCTCCCGTCCATGAACGTGGACGCCCGGCACCCGAAGCTCCCTGCGCCGGTGGCTTTG
CCCCTTCTGGCCTCAGCCTTGGCCCCTTTGAACATGGAGCAGCTCTGCAAGGTATTGATGCACGCCATGGATGCTACTCTTCCTTGTCTCGTGTGGTGGA
TGTTG
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