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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2777  (registered. 2012)
Contig Information
Length 1728 bp
Clones alternative view 97 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_e Seed DPA10 4
Wh_oh Pistil at heading date 1
Wh_yd Spikelet at late flowering 2
Wh_DPA20 Seed DPA20 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 3
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 4
Wh_VSCB Liquid cultured tissue 13
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XA Root 5
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 15
WH_XE Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23℃ 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1703227|sp|P52894.1|ALA2_HORVU|ALA2_HORVU RecName: Full=Alanine aminotransferase 2; Short=ALAAT-2; AltName:
Score 933
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2777 
ACGCGAAGGTATTCCGCCACAGATATTTTGCATTTTAAAGGTGGAAATAAAAATTCTCAGTTGCCAATTTGCCATCAAAGGCATCAGACTGGTAATCTGA
TATAGTATCACACACACAAGCCATGGATTTGCTTTATTTTGTCTCATCTACAGGATACTGCTGTCAACGCGGGCAAAAACGCCTAGGGAAAATCCATGAG
GCTTGCATGTAATCCCACACATGTTACACCAGTTTAGTCACGGTACTCTGCCATGAACGTCTCATGGAACACCGTGAAGCGGGAGATGATTGCCGGGATC
TTCTCCTCCTGCGGAAGGATCGTGCACCTGAAGTGCCATGTGCCAGGAACCTGGCCAAATCCAGATCCAGGGACAACGACGATTCCTGTCGACTCAAGGA
GACGAAGAGCATAGAATGCATCAGGTGCTTTGTTAGCAGCTTTAGCAGCCTCAATCGCCTTCTGTGGCAGACAGATTTGAGGGAACAGGTACATTGCTCC
TTCAGCCTTGTTGCAAGTAATTCCCTCAAGTTTACTGAATGCAACCTCCAATGCCTTCGCACGACGAGCTAACGATGCAAGGATTCCATCTTTCTCTGCC
TTGTATGAAGCATATGATTCATCACTAGCCTTTGGTGGGTTCATGACAAGACTAGCAAGGATCTGGCCGGTGATATTGGAACATAGGTTCACTGATGCTA
TTTTGTAGATCTGCTCTCTTACTGGAGCACTGAAGCCAGTAATCTCCATGTAACCACCTCTTTTACCACACTCACCATAATATCCCTTAGAAACAGATTG
ATATGATACTAGAGGGAGATCCTCCTCGCCGTATCCCAAGGATCTCACTATCTTCTTGAAAGAGTGGAATTTCTTGTTGTCAGCGTAGATGTTCTCTTGG
TATACCTCGTCAGCCAGAAGAACAAGACCCTCATTTTTGCAGAACTTCACTATGTCATATTGGTTTTCCTCAGCAAGTACCTGTCCAGTAGGATTTCCTG
GATTGATAACCACCAAAGCCCTAACGTCAATGCCTCTTGAGCGAGCATCTTCGAGTTGCTTCTTAACATCAGAGATTTCCAAACCCCAGCCCGTCGATTC
ATTGAGATAGTATGGGACAAGAGATCCGCCATGAAGAGCTATAGAAGCCGAGTACAAAGGGTACTGAGGAATCGGGACAAGAATGCCATCTTTCTCATTC
CTTATCAGTAATTGCATCATCAGGTGCACCCCAGGGCTTGCTCCATCTGTAAGAAAAATGTCATCAGCATTAGCAGGGAATCCATCTCGTGAAGCGATCC
CAGAAGCAATTGCATCACGAAGTCCTTTTATACCCTGGCTATGACTGTATGCTCCTGTTGCTCTTCCAGGTATCAAGGCAAGAATCTGCTTTGCTCGAGA
AATAGAATCAGCACTGAACAATGTTTTGATTTCCTCCTTTTTCAACAGATCTGGATGATCACAAAGTGCAAGAACCTCCCTGAAGAATGTAACTGGTTGC
TGACCAAGAGATTGTGGGTTCCCAATGTTACAATAGAGGATCTCATCAAAAGGTAGAGATCCTGGTTGAGTTTGAAGCTGTTGCTGCAAGCGCTGAGCAT
GGATGACAATCTCTCCACGCACAGCATACTCACATTTTAAAACCTTGGGGTTGAGGTTGTCCACGGCGACGGTGGCAGCCATGGCGAGATCAACTAAAGG
CGAAGGGGGCGGCAGCGGCAGAGCAGCG
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