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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig24938  (registered. 2012)
Contig Information
Length 1232 bp
Clones alternative view 29 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 1
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 4
Wh_SHC Shoot grown with cold treatment 1
Wh_V483 Shoot grown under cold condition for 3days 1
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456505|ref|NP_001051853.1|| Os03g0841700 [Oryza sativa (japonica cultivar-group)]
Score 490
Evalue 1.00E-136
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig24938 
TCTCCCCCAAATCGGCCGAGTAAACCCTAGCTAAACCCCCCGGCGCCGGCGAGCGAGATGAACTTCAAGGGCGCCAGGATGCCGAGCGCGCCGGCGGGCG
CGGGCGCGCTGGTCAAGCTCGGGCTGCTGGGAGGCGCGGCGCTCTACCTCGGCAACAAGACCCTCTACAACGTCGAGGGAGGCCACCGGGCCATCGTCTT
CAACCGCCTCGAGGGGATCAAGGACAAGGTCTACCCCGAGGGGACTCACATCGTCATCCCCTGGTTCGAGAGGCCCATCATCTACGACGTCCGCGCGCGA
CCCAACCTCGTCGAGAGCACCTCCGGGAGCCGGGATCTCCAGATGGTGAGAATTGGTCTTCGTGTTCTGACACGACCTATGCCAGAGAGACTACCAACTA
TGTACAGGACCCTGGGGGAGAACTATAATGAGAGAGTATTGCCTTCAATCATTCATGAAACCCTCAAAGCTGTGGTTGCCCAGTACAATGCCAGTCAGCT
AATCACACAGAGAGAGGCTGTGAGCAGGGAGATCAGGAAGATTCTGACAGAGAGGGCGAAGAACTTCAACATCGCTCTGGATGATGTGTCCATTACCAGT
CTCAGCTTTGGTAAAGAGTTCACTCATGCCATTGAAGCCAAACAGGTTGCTGCTCAGGAAGCTGAGCGTGCCAAGTTCATTGTTGAGAAGGCTGAGCAAG
ACAAGAAAAGTGCAATTATCAGGGCACAGGGAGAGGCAAAGAGTGCAGAGCTGATTGGCAATGCCATCGCCAACAACCCTGCTTTCGTGGCGCTCAGGCA
GATTGAAGCCGCCAGGGAGATCGCCCACACCATCGCAGCCTCCAACAACAAGGTGTTCCTCGACTCGGGCGACCTGCTGCTTGGGCTCCAGTCGCTCAAG
ATGCTCAACAACAACAACAAGAAATGAGACCGTCTCCTGTGACAGCGTGTTGCGGTTGCCGCCGGTCTTGTCTACATGGAAGAAGAGTACTTTTGAGAGG
AACGTAAGTCGCTTAGTTTCTAGCATTCCCGACCCGAAAACAAGAAAGACGCCCTTTGCTACTGTGAATTATTTGCGCACTTTTTCAAGTGAACCTGTCA
GCTACTATTGCTGTGCGTAGCTTATAACGTCTGGGCGGTTATGTGGTGATTATTATGCTGGCCGTTTCATGTTCATCTTACGCATTTCATTGTGCTGTGA
CTTGCTTTGCTTGTGGAAAGCTAAAAAAAAAA
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