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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMC_all.Contig1509
Contig Information
Length 937 bp
Tissue Dormant seed with cold treatment after water absorption
Clones 3 Clones [Download: CSV  ,  FASTA ]
whec10a15    whec7j01    rwhec7j01   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0112200 [Oryza sativa (japonica cultivar-group)] >gi|7363290|dbj|BAA93034.1| methylthioadenosine/S-adenosyl homocysteine nucleosidase [Oryza sativa Japonica Group] >gi|32352128|dbj|BAC78557.1| hypothetical protein [Oryza sativa Japonica Group] >gi|113594632|dbj|BAF18506.1| Os06g0112200 [Oryza sativa (japonica cultivar-group)] >gi|125595804|gb|EAZ35584.1| hypothetical protein OsJ_019067 [Oryza sativa (japonica cultivar-group)] >gi|215694661|dbj|BAG89852.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215740802|dbj|BAG96958.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1117
Evalue 3.93138e-120
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMC_all.Contig1509 
AGCGCCGCCGCCGAGGCCGGCGCCATCTCCAAGGTCCTCGTCGTCATAGCGATGCAGACGGAGGCGCTCCCGCTCGTCACCCGGTTCCAGCTCGTCGAGG
CGGCCGCCGACGAATCCATATTTCCTAAAGGTGCCCCATGGACGCGGTACCATGGCGACTACAAAGGCCTCCACATCGATCTCGTCTGGCCTGGAAAAGA
TCCTGTGCTCGGAGTTGACAGTGTTGGTACAGTATCCGCAGCTCTGGTGACTTATGCTTCTATACAATTGTTGAAGCCAGACCTTATCATCAACGCTGGT
ACTGCTGGTGGTTTTAAGGCCAGAGGAGCAGGTATTGGGGATGTCTTCTTAGCTTCAGATGTTGCATTCCATGACAGGAGAATACCCATTCCTGTTTTTG
ACAGTTATGGAATTGGAGCACGAAAAACATTTGAAACCCCAAATATAGTGAAGGAACTCAATTTGAAGGTTGGGAAACTGTCAACTGGTGATTCTCTGGA
TATGTCCCCCCATGATGAGACAGCAATACTGAGCAATGAAGCTACAGTCAAGGATATGGAGGGAGCAGCGGTGGCGTATGTTGCTGACTTGTTCTCGACA
CCCGCTATCTTTGTCAAGGCTGTGACTGACATTGTTGATGGGGAGAAGCCAACAGCCGAGGAGTTTCTGCAAAACCTGATCTCGGTGACGATGGCGCTGG
ACCAGGCAGTCTTGCAAGTGGTAGACTTCATCAGCGGCAAATGTATCTCTGATCTCTGAACGCCGAACACTCCGCCATGCTGTTCTGGGGTCCACAAACT
GAGGGAGCCTGAATATATATTGTTGGATGTATAATGTTTCCTGGGGGGTTTCACACACGATTTTACATTATCGTAACCCCTATGTAAAAATTTCTTGGCG
ATTACTCGGAGCCATTGTATGGGATTTAAAAAAAAAA
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