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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25074  (registered. 2003)
Contig Information
Length 1512 bp
Clones 59 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 14
Wh_EMC Dormant seed with cold treatment after water absorption 32
Wh_EMI Dormant seed with water absorption after breaking 11
Wh_SHC Shoot grown with cold treatment 2
Homology (BLAST) Top Hit RecName: Full=1-Cys peroxiredoxin PER1; AltName: Full=Thioredoxin peroxidase; AltName: Full=Rehydrin homolog; AltName: Full=B15C >gi|471321|emb|CAA54066.1| HvB15C [Hordeum vulgare subsp. vulgare] >gi|1694833|emb|CAA65387.1| peroxiredoxin [Hordeum vulgare subsp. vulgare]
Score 1145
Evalue 4.44619e-123
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25074 
TTTTTTCCACAACTCCGGAATTTTTTTTATTTGGCAGAACAAACTATGTGCTTCATCGTTGACGTACATTATTCATATGTTATTCATAAAGGCACATTGA
CAAGGTTTACATAGATGACAGAGTAGGAACATGAAAAGGGAACATGGCGGACATATAGTTGCTACAGATCAAGGCATGCACACGGACGTGAGCGGAACGC
GGACCGACGTTCTGCCTCCGGCCGGTGCTAGCTAGCTTGCTACTAGTAGAAGTCTAAGACGACAAGTTGATCAGCTGCAGGTGCATGATCATGGAGACTT
GTTGCTGTCGGCAGAGCCGCGAGCAGCGGGAGGGTTCCCAGGGACCACGGGCGGCAGCGGCAGTTTGGGTAGTGGTACCAGAGGCGGCAGCGGCACCGGC
AACCCGGGCACCAGATCCTTCACCTCGTCGACGCCGCCATTCCCTTTCAGCTCCCTCCCGTCGCAGGATGCGAGCACCACCACCACCAGCAGCAGCAGGC
GGAGCGCGACATCCAGACGCTTCGCCATTGCTACGCTTTGCCAATCAAGAACCGGAGATATTATTCTTGGCCCTGCTTCGGTATGCGCTATGGTAGCTGT
GTCCGCCGCAGCAGCAAAGAACTACGCAGTAGCTAGCTTTCAGTGTCTCTCATCCATCATGCCGGGCCTCACCATCGGCGACACCGTCCCCAACCTGGAG
CTGGACTCCACCCACGGCAAGATCCGCATCCACGACTACGTCGGCAACGGCTACGTCATCCTCTTCTCGCACCCCGGCGATTTCACCCCGGTGTGCACGA
CGGAGCTGGCGGCCATGGCCAACTACGCCAAGGAGTTCGAGAAGCGGGGCGTGAAGCTGCTCGGCATCTCCTGCGACGACGTGCAGTCCCACAAGGAGTG
GACCAAGGACATCGAGGCCTACAAGCCTGGGAGCAAGGTGACGTACCCGATCATGGCGGACCCGGACCGGTCGGCCATCAAGCAGCTCAACATGGTGGAC
CCGGACGAGAAGGACGGCGAGGGGCAGCTGCCGTCCCGCACCCTGCACATCGTGGGGCCGGACAAGGTGGTGAAGCTGAGCTTCCTGTACCCGTCGTGCA
CGGGGCGGAACATGGACGAGGTGGTGCGCGCCGTGGACTCGCTGCTGACGGCGGCCAAGCACAAGGTGGCCACCCCGGCCAACTGGAAGCCCGGGGAGTG
CGTGGTGATCGCGCCCGGCGTCTCCGACGACGAGGCCAAGAAGATGTTTCCCCAGGGGTTTGAGACCGCCGACCTGCCCTCCAAGAAGGGCTACCTCCGC
TTCACCAAGGTCTAGGCGTGCGTCCGTGCTAGCTCGGTTACTTGTGGCGGTCTGTGTCGTCGTGGTGCGTGCGTGCTTTTGTGGTGGTATGTGTCGTGTT
TCTTCTGTAAATCTACCCAGCGTCGCTGGGCCTATGTATGTGTACTGTGACTTTGCCACTTTCATGTGTTCGATCGCCGGTATATCCATGTGTGTGTTGG
TCAAAAAAAAAA
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