Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig11258  (registered. 2007)
Contig Information
Length 419 bp
Clones 3 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit SPT16 (GLOBAL TRANSCRIPTION FACTOR C); metalloexopeptidase [Arabidopsis thaliana] >gi|75220257|sp|O82491|SPT16_ARATH RecName: Full=FACT complex subunit SPT16; AltName: Full=Facilitates chromatin transcription complex subunit SPT16 >gi|3600033|gb|AAC35521.1| contains similarity to the N terminal domain of the E1 protein (Pfam: E1_N.hmm, score: 12.36) [Arabidopsis thaliana] >gi|7267769|emb|CAB81172.1| putative transcriptional regulator [Arabidopsis thaliana]
Score 75
Evalue 5.92826
Total Hit Count 2
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig11258 
TTTTTTTTTTGGTGGCATGTGATATAGTAATGCATTTCACTTCCACAGGCACAAGTAGGCCTTTAAAATAGCAGCAGTGTAACATGTGAGGGGTGTCAAA
ACCTCTAAACAATATCAGGAAGGGCTGTCATAGGGTCCATACAAGCTCAGGTAGCAACTTCAAGATCCGGCGATATTAAGAAGAAAACTTCCACATGAGG
CAAAATATGTTTTGGCAATACTATAATATCTGTCTTCACGTAAGCTAACTGCTGCAGAGCACAGCTGCGGGGACACTGAGCTTCGACCGCCCGATGTATA
GAGAACTGGATATGATATAGCAAAAGCACTGGGTTTCAAAGCAACCCAGGTTTTCGTCCATTCAATGTTTCAATCTAACTCCTTAGTGCTGAAATCTGCC
ACCCACCACCCAAGTCTAC
page-top