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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11088  (registered. 2002)
Contig Information
Length 979 bp
Clones 4 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_f Spike at flowering date 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0832400 [Oryza sativa (japonica cultivar-group)] >gi|31249768|gb|AAP46260.1| putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] >gi|108711925|gb|ABF99720.1| protein phosphatase 2C family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550272|dbj|BAF13715.1| Os03g0832400 [Oryza sativa (japonica cultivar-group)] >gi|215767924|dbj|BAH00153.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218194034|gb|EEC76461.1| hypothetical protein OsI_14190 [Oryza sativa Indica Group]
Score 589
Evalue 7.01305e-59
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig11088 
gcagatcgtcgccgagcagctctccaccgagcacaacgccaatcacgaggctgtccggcaggagctcatggcccagcaccccgatgacccgcagatcgtc
gcgcttaagcatggggtctggagagtcaagggcatcatacaggtgtcgcggtcactcggtgatgcatacctgaaagacgcaaagtataacacggaacgga
tcaaaccaaagttcagagtctctgagccaTTCAGCAGACCTATAATGAGTGCCGAACcaaccgATCGTCTCGCGCAGCCTTGAACCAAGTGACTGCTTCG
TCATATTTGCTTCAGATGGCTTGTGGGAGCACTTGACTAACCAGGAAGCTGTGGAGATTGTTCACAacaaatCAACGCGCTGGGAGCGCAAGAAGGCTCA
TAAAAGCAGCACtccaaagAAGCAGCGCGGAAGCGTGAGATGCGGTACTCAGACCTCATGAGGATCGACAAG*AAAGTCCGCCGGCATTTCCACGACGAC
ATCACTGTCATCGTCCTATTCATAAATCACGAGCTGTTAGCCAAAGGAAATGCGCAAGTGCCGCCCCTTTCCATCAGATCCGCCTTAGACCACTGATCAT
GAACCACTTCACCCATGGATGCTCAGTTCCTGTGAGCAGAAATCGCCTGTGAGATAGATGGCTTCTTCAACAACCAGTCTCTGTGAACAGTGCAGAAATC
GCCCGCCTGCAGCAGTTTTCTTTTCCTCGTCTTACTTTTCTCTTGGTTTTTGCACATAAAATTTGACTACTTGTTAAGTTGCCAGTTTTCCCcaatgctg
cggggttcCCCCCTCGTATCGTATCGATGTCGGATAAATgtggaTAGTCTTCAGGCCTGGAGATTTGCCTAGAGTTTATGGGGgaacctCTTCTTCcttc
cctcCTAGAAAAGATGTTGATGAGGGAgccttgTTAAGGAtgttgtaaccgtaaatgatggttctcgcagcttacaata
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