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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21597  (registered. 2007)
Contig Information
Length 1088 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_VABA Shoot with ABA treatment 6
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0117100 [Oryza sativa (japonica cultivar-group)] >gi|122247603|sp|Q10SM7|PX111_ORYSJ RecName: Full=Peroxisomal membrane protein 11-1; AltName: Full=Peroxin-11-1; AltName: Full=OsPEX11-1 >gi|108705864|gb|ABF93659.1| Peroxisomal membrane protein PEX11-1, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113547236|dbj|BAF10679.1| Os03g0117100 [Oryza sativa (japonica cultivar-group)] >gi|215737665|dbj|BAG96795.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215737763|dbj|BAG96893.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218191967|gb|EEC74394.1| hypothetical protein OsI_09743 [Oryza sativa Indica Group]
Score 1030
Evalue 6.05772e-110
Total Hit Count 127
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21597 
TTTTTTTTTTACTTAATTATTACCTTTGGTTCGCAAGTGCCAACACTGTTGGCCTACATAAGCACCATGCACGAACACATGATCGACCATACATACCATG
TCCATTAGTACTGTTCATAGCATACCGTGTACATGTATATGTATGAAAACCGTACGTACAGATGATCGACATCATCATTCTATACTGCTACGTACACAGG
AATAAAGCATCTCGGATTCCATGCTCGAGCACAGCACCGACTCCAATTAAGTGGAGGCGGACTGTGGAGCAGAGCGGTGTAGCGTTCCTCGCGATTGCTC
ACGCCTTGAGTTTGGCCAGGGGAGCCCGAGACGGGAGTTGCTGGTAGCAGGAGATGAGGGAGGTGACGAAGCCGAAGGCCCCGGTGACCCTGGGGGTGAC
CTTCTTGGGCGCCAGCTGCAGCAGCCCCACGGCCACCACCACGTCCATCCCCGCCTTCACCAGCGCCAGCAGCCGGTCGTCCGACTGCTTCATCTTCCCC
AGGTACTGCTCGTCCTCGTATTTGTCGGCGCCCCTGAGCTCCTTGGCGCGCTTCCTCATCGCCTTCGATAGCCTCTTGAGCTCCCCAAGCTCGACTAGGC
TTGCACAGACAGAGGAGGCCATCCAGCAGTAGAGGGATATCCTGGCGATGCGGTCCGTGCGCTCCTTGTTCTGGTATATCCCTGATCTTCCTATCCACAC
GAACTGGTCCAGGAACAGGAAGGTCGACAGCAGCGCATTCTTAGACTTCCCAAGCAAGACGAGTGTGAGAGGGGTCCCTTTGGGGGCTGGGCTGATGAGA
GCATGCAGATCGTTCACCCACTTGAGGAGGCGGAAGACCTTGCGAGCCAAGGTGGTGGACTTGTCGACGTTCTGCGCGGTGCCGGGCTGGCCGTTGCTGA
TGAACTTGGAGCCGTACTGGATGGCCCTGCAGATCTTGTCCCGAGCCTCCGCCTTGTTCAGGTACAGCACCGCCAGCCCCAGCTCCGCCCGCGTCGCCTC
CAACGAGCACATCTTCCTTCCTTGCTAATGACGGAGCGGGGCGAGGGCAGGAGGATGGAGAAGGGGCCGGCCGGCTGGTGCTTAGCTG
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