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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig32442  (registered. 2012)
Contig Information
Length 1657 bp
Clones alternative view 133 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 1
Wh_r Root 7
Wh_yd Spikelet at late flowering 6
Wh_CSEC Callus 9
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 3
Wh_KMP Shoot grown under continuous light 4
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 8
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 2
Wh_VSCB Liquid cultured tissue 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 9
WH_XA Root 3
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125559175|gb|EAZ04711.1|| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
Score 540
Evalue 2.00E-151
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig32442 
CTTAGGGATTATCCGCGACGATCCACATGCCCTGCGCGCCGCATTTATTGAAGCCGACAGCCAGGCGGATGTGGTGATCAGTTCCGGCGGTGTTTCAGTG
GGTGAAGCGGATTACACCAAAACCATTCTTGAAGAGCTGGGGGAGATCGCCTTCTGGAAGCTGGCGATTAAACCGGGTAAACCGTTCGCGTTCGGTAAAC
TTTCTAATAGCTGGTTCTGCGGCCTGCCGGGCAACCCGGTTTCAGCGACGCTGACCTTCTATCAACTGGTACAGCCTTTGCTGGCAACACTAAGCGGCAA
CACCGCCAGCGGCCTGCCCGCGCGCCAGCGCGTCCACCCGTGCCTCCTCTTCCTCCTCGCTCTCTCGCGCACGGGGCTCGCGTCCGAAACCCTAACCTCC
CACCATGGCGGCTGAAGGCGGTGGCGTCCGGGCGCTGTCCCAGCGCGAGCAGGACATCCAGATGATGCTCGCCGCCGACGTCCACCTCGGCACCAAGAAC
TGCGACTTCCAGATGGAGCGCTACGTCTACAAGCGCCGCACTGACGGCATTTACATCATCAACCTTGGCAAGACCTGGGAGAAGCTTCAGATGGCCGCAA
GGGTCATTGTTGCCATTGAAAACCCTCAGGATATCATTGTGCAATCTGCTAGGCCCTATGGACAGAGGGCTGTCCTCAAGTTTGCCCAGTACACTGGTGC
TAACGCCATTGCTGGAAGGCACACTCCTGGTACATTCACCAACCAGATGCAGACTTCATTCAGTGAGCCACGCCTTCTTATCCTGACCGACCCCAGGACT
GATCACCAGCCTATCAAGGAGTCTGCACTTGGAAACATCCCCACCATTGCCTTCTGCGACACTGACTCTCCTATGCGTTACGTTGATATTGGCATTCCTG
CTAACAACAAGGGGAAGCAGAGCATTGGTTGCCTATTTTGGCTGCTCGCCAGGATGGTTCTGCAGATGCGTGGTACCATTCTCCCAGGACACAAGTGGGA
AATCATGGTTGATCTGTTCTTCTACAGGGACCCAGAGGAAGCTAAGGAGCTTGAGGAAGATGAGGCTTTGGGTGCTCCTGAGTACGCTGCAGTTGCAGAG
TACACTGCCCCAGCGGGAGATACCTGGGGTGCTGAATGGCCAGGAGCTGCAGCTCCAGCTGCTGCCGTCGAAGCCCCGGCTGGTGCTGAGTGGACTGGTG
CTCCAGCTCCTGCGGCCGATGGATGGGATGCCGTTGCAGCACCTGCCCCTACTGGCTGGGAACAGGGCAGTGCTCCGGCACCTGCAGCAGCACCAGCTGC
TACTCAGAACTGGGAGTGAAGGACTTGACCCAAGGTTTATGCTACTCGGCACTCTGGAGTGAAGGAGTTCGGCCGTGGTTTATTGGTGAAGGCTGTGTTA
TTTGCCCCGTCAGTACTCTGTTGGTAGACGCTGGTTAAGTAGATTTAATTTTTACAGTACTGAGTTATGTTAGATGGAAATCGATTTTTGTCTTCTTGGC
TTTGCAGGGGTTGGGAGTTATCACCCCAGCCTTCTGTTGCCTCTCATCGAATAGCTTTATTTGAAGTTCCATTTTGCCAGCAAGTGTATGGTCAGATTCT
CTTGAAATGTTATAAAAGCCCGGATCATGTGATACCCAAAAAAAAAAATTATTTATG
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