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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig30486  (registered. 2012)
Contig Information
Length 2249 bp
Clones alternative view 570 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 11
Wh_dL Crown of seedling 7
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 5
Wh_oh Pistil at heading date 5
Wh_r Root 8
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 14
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 27
Wh_EMI Dormant seed with water absorption after breaking 47
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 17
Wh_KMV Shoot grown with continuous light after cold treatment 14
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 12
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 6
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 16
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 10
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 9
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 9
WH_XN Leaves, plant was grown at constant 23Ž 20
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 6
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 14
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 11
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 12
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 21
WH_XA Root 23
WH_XB Root 34
WH_XC Root, treated at 50 microM Al for 6h 31
WH_XD Root, treated at 50 microM Al for 6h 30
WH_XE Seedling, infected with leaf rust 20
WH_XF Seedling, infected with leaf rust 18
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 20
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456247|ref|NP_001051724.1|| Os03g0821100 [Oryza sativa (japonica cultivar-group)]
Score 1239
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig30486 
TTTTTTTTTTAAGCTAAGAATTCAGAATGAAATTTTTTTTTTTTTTTAGTCCAAATAATAAGCATTAAGCTGAAATCAACAATGAGCCAAAACATGCATC
ATTGCATTGTTCACGACACACACAAGTCTCGTGATGCTACAGACCAAAAAGTACAACAAAACTTCCAGCCCAGGTGATATGATTGGCACCCAGGACTGAA
TAAAATGGTGTATAGTGTATTTCTCACTATATAAAAGCGACTAACTTAGTCGACCTCCTCGATCTTGGGGCCAGCACCGCCGCTCGCAGCCGGCGCGTCC
TCGTCCATGCCTCCGGGCATGTCAGCACCGGCGCCCTGGTACATCTTGGCGATGATGGGGTTGCAGAGGCCCTCCAGCTCCTTCATCTTGTCCTCAAACT
CGTCAACCTCACCGAGCTGGTTGGCGTCAAGCCACTGGATCGCGGCGTCAACGGCGTCCTCGATCTTCTTCTTGTCATCAGCAGGCAGCTTGGAGGCGAT
CTTCTCGTCCTGGATGGTGTTCCTCATGTTGTAGGCGTAGTTCTCCAGGGAGTTCTTGGCGTCAACCTTCTTCTTGTGCTCCTCGTCCTCAGACTTGTAC
TTCTCTGCGTCCTGGACCATCTTCTCAATGTCGTCCTTGCTCAGCCTGCCCTTGTCGTTGGTGATGGTGATCTTGTTCTTCTGGCCAGTGGTCTTGTCCT
CAGCAGAGACATTCAGGATACCGTTGGCATCAATGTCGAAGCAGACAGTGATCTGGGGAACACCCCTGGGCGCAGGCGGGATGCCAGAGAGCTCAAACTT
GCCGAGCAGGTTGTTGTCCCTGGTCCTTGTCCTCTCACCCTCAAACACCTGGATGAGCACACCAGGCTGGTTGTCGGAGTAGGTGGAGAAGACCTGCTCC
TTCTTGGTGGGGATGGTGGTGTTCCTGGTGATGAGCACAGTCATGACTCCTCCAGCAGTCTCAAGACCAAGAGACAGTGGGGTGACATCCAGGAGGAGAA
GGTCCTGCACCTTCTCGTTCCCCTCACCGCTGAGGATTGCAGCCTGGACGGCAGCACCGTAGGCAACAGCTTCATCAGGGTTGATGCTCTTGCAGAGCTC
CTTCCCGTTGAAGAAGTCCTGCAGCAGCTGCTGAACTCTGGGGATTCTGGTGGAACCACCAACAAGCACAACATCATGGATAGTGCTCTTGTCCATCTTG
GCATCCCTCAGGCACTTCTCCACTGGCTCCATGCACTTCCTGAAGAGGTCCATGTTGAGCTCCTCAAACCTGGCCCTGGTGATGGTGGAATAGAAATCAA
CTCCCTCGAAGAGTGAATCGATCTCAATGGTGGTTTGGGCAGTGGAAGAAAGGGTCCTCTTCGCCCTCTCACAAGAAGTCCTGAGCCTTCTCAAAGACCT
GGGGTTTCCACTGATATCCTTCTTGTGCTTCCTCTTGAACTCTTGGACAAAGTGGTTCACCATACGGTTGTCAAAGTCCTCCCCACCAAGGTGAGTGTCA
CCAGCCGTGGCCTTCACCTCAAAAATACCCTCCTCAATGGTAAGGAGAGAGACATCAAAAGTGCCACCACCAAGGTCAAAGATAAGCACATTCTTCTCAC
CGACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATTGCAGCTGCTGTTGGCTCGTTGATGATACGCATCACATTAAGACCAGCAATAACACCGGCATC
CTTGGTTGCCTGCCTCTGGGAATCATTGAAGTAAGCAGGCACGGTGACAACAGCATTCTTAATAGTTACTCCTAGGTAAGCCTCAGCGATCTCACGCATC
TTGATGAGGACCATGGAAGAAATTTCTTCAGCTGAGAACTGCTTGTCCTCACCCTTGTACTGCACTACAATCATAGGCTTGTCTGCGGGGCCAGGAATAA
CCTTGTACGGCCACATCTTAATATCACTCTGGACAGGGGCATCAGCAAACCTTCTGCCAATAAGACGCTTCGCATCGAAGACGGTGTTGATGGGGTTCAT
GGCGACCTGGTTCTTGGCGGCATCGCCGATGAGGCGCTCCGAGTCGGTGAAGGCGACGTACGAGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATC
TCGACGCGGTCGTGCTGCCACACGCCGACGCACGAGTAGGTGGTGCCGAGGTCGATGCCGATGGCCGGCCCATCGCCCTTGGTCGGCGCCATGGCTCTAG
CTAGATCGAGAGGAAGGAAGCTAAGCTAGCTATGGACTAGGGTTAGGGT
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