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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig22498  (registered. 2012)
Contig Information
Length 2025 bp
Clones alternative view 1963 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_r Root 2
Wh_SH - 4
Wh_CSEC Callus 1
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 6
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 20
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23Ž 60
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 13
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 23
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 10
WH_XR Roots, 18 day old plants were grown hydroponically 539
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 329
WH_XT Roots, 18 day old plants were grown hydroponically 469
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 374
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 8
WH_XE Seedling, infected with leaf rust 11
WH_XF Seedling, infected with leaf rust 19
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23Ž 6
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 14
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1171037|sp|P43400.1|MT1_WHEAT|MT1_WHEAT RecName: Full=Metallothionein-like protein 1; Short=MT-1
Score 169
Evalue 2.00E-39
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig22498 
TTTTTTTTTTCAAATTTCAAGAATTTGTATTCAATTTTAATTATACTATTTAACAGGTTAAGGTCTCGTTCGTTTTCGGAATTAACCAGACAAATCAATC
CACCAACTAAAAACGGCCATGCACCACCACCCACTTAATCAAGAAAGAGCTATCAATCTGTCAATCCTCAAAGTGTCCGGACCCGGTAAGTTTCCCCGTG
TTGGGTCAAATTAAGCCGCAGGTTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCACTCTTGCGACCATACTCCCCCCGGAGTCTGAATA
CTTATGATTTCTCATATTGTGCTAGGAAAATCATCCATGTAATATTTCCTAATCCAAAGTCGACATTGTTTATGGTTAAGACTACGACGGTATCTAATCA
TCTTCGATCCCCTAACTTTCGTTCTTGATCAATGAAAACATCCTTGTCAAATGCTTTCGCAGTAGTTTGTCTTTGATCAATCATAGGATTTCACCCCTAG
CGATCAAATACAAGTGACCCCAACTATCCCTTTTAATCATTACTATTAACCTTCAAAACCAACAAAATCAAGGTTAATGTCCTATTCTATTATCCCATGC
TGTAATATTCAATTGTACATGTCATGTCTGCTTTAAACACTCTAATTTTTTCAAAGTAAACTATCTATTTCTACAAGAAAAGGTTTAACCCCAATCTTTA
AAAAAAAATAAAAAGAAAGGAAAAAATATATAGGAATGACTTTGCTTTAAAACAAAGATCCCTTTATATAAATCCCTCAAGTCCAACTACGAGCTTTTTA
ACCGCAACAACTTTAATATACACTCTTGGAGCTGGAGTTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATTGTTAGTCGTTAATGTTTTTAAATTGT
TCTCATTCCAATCATTGTTCCCGTTGGGACCAATACTAGTATTTCTCGTCACTACCTCCCCGAATTGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCT
TGGAAGTAATGGCCGTCTCTCAGGCCTTTTCTCCGGAATCAAACCCAAATTCTCCGTTACCCATCAAAACCATGGTAATCCACTAAATTACCATCGAAAG
TTAATAGGTCAGAAACTCGTTCCTATCATCTATAAATAATTAAATTTATGATTCGTAAGTTTACTATGATTCTTCAATTTTTTTTTACAAATCCCCTAAA
AAATACCGATTAAAGTATAATCTAGAGTTTGGAATGATTTGTATTGATTTTGCATATTAATAAATACATTCGTTCCCTTGCGAGTTCGAACTTTTTGCAT
GTATTAGCTCTAGAATTACTACGGTTATCCAAGTAATTTATACAATAGAGTAGATTGTAACTGATTTAATGAGCCATCCGCAGGTTTACGGTTAAAAAAT
ATTTATCCTTAGACGTGCATGGCTTAATCTTTAAGACAAGCATATGACTTCATCATCATCCTCGACACCAAAGCTCATCTTCTTCTCCTTGAAATCTTTT
TGGGTTCATCAGATTTGGAGGATGTCTTGCAACTGTGGATCCGGTTGCAGCTGCGGCTCAGACTGCAAGTGCGGGAAGATGTACCCTGATCTGACGGAGC
AGGGCAGTGCCGCGGCCCAGGTCGCCGCCGTGGTCGTCCTCGGCGTGGCGCCTGAGAACAAGGCGGGGCAGTTCGAGGTGGCCGCCGGCCAGTCCGGCGA
GGGCTGCAGCTGCGGCGACAACTGCAAGTGCAACCCCTGCAACTGTTAAGCTGCATGCACTCGTGTGATGGTGTGAGAGTATACGTGAATAACGAGCGTC
CCTCTGATCTGATGGAGTCGAGCAAGGGTGCGTGTGCGTGTGCGTGTGGTTTACTTGCTCGCTCTCCGCCTATGCTCTGCCCTTGGTGTCCTTGTGTGTA
TGTGTGTGCACGTGTCCCTGTAATTGCTTCATCTATCTCCACTATGGATGGAGTGATGAATATGTAAGAATGAATGATTTACCTAATTAACTACTCCTAA
AAAAAAACTTCGGTTAAAAAAAAAA
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