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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_DPA20_all.Contig2306
Contig Information
Length 1654 bp
Tissue Seed DPA20
Clones 8 Clones [Download: CSV  ,  FASTA ]
whdp2f14    whdp18f10    whdp19f24    whdp20e07    rwhdp9n08    rwhdp18f10    rwhdp19f24    rwhdp20e07   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0548200 [Oryza sativa (japonica cultivar-group)] >gi|42407549|dbj|BAD10754.1| putative ER lumen protein-retaining receptor [Oryza sativa Japonica Group] >gi|42408730|dbj|BAD09948.1| putative ER lumen protein-retaining receptor [Oryza sativa Japonica Group] >gi|113624402|dbj|BAF24347.1| Os08g0548200 [Oryza sativa (japonica cultivar-group)] >gi|215686415|dbj|BAG87700.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215734918|dbj|BAG95640.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215765587|dbj|BAG87284.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218201565|gb|EEC83992.1| hypothetical protein OsI_30151 [Oryza sativa Indica Group]
Score 1294
Evalue 2.63034e-140
Total Hit Count 398
Registered year 2003
Contig Sequence     [ Download ]
>Wh_DPA20_all.Contig2306 
TTTTTTTTTTGAAAACTAGTCTGGATAAATAGTCAGCTATAGATAGTATTCTCACAGCCTACATTTCACGACCAAGAGTCTCTGGTACAATTTTCACCAA
ACAGTTTATAACTGAAAAAGAAAAGGCAAACAAGACTCTTGAATCCATCCCACATGGGAAGAGCGAAGGTTGGGCGCCAGAAGCAGAGCCACTGTTCAAC
AGTAAGACACAGCACCAAACAAATGAGTTGTCCATCATGATGCAGATTTTACACCACCCCAGAAGGAAGTCGCAGCACTAGTTGTCCACCAGCAAGACTC
TTCACATAGTAGTAGCAGAAATCTGCAAGGATGAACGTCTGGACGATTTCAGAGAGGAGAACCATCGATGGCCAAAAGCCATAGCCCAGAGCAGTCAATA
ATCTGCCACGAGTATCCAAGACCTGAAGGACCCAGTGTGCACAGCTAAGGAACCTTGCCACTCCCAATGCAAACACATAATGAGCTGTGAATGGTTCAAC
AATCTTTGTATTCTGCATCAAGCGCAACTGGGGCAGCACTGAAACAGCTTCCAAGTAAACACAGAAGGCCCAGCAGATCCTATTGATCATGACATGTGAG
GTTGAAGGATGAGCAATAAATGCCAGCACACAACATGGTACAACCACGTAGTACAATGCAAAATTGTCCTTGTCCAACATATAAGTTGACCTCAGTCTGA
ACCGAATCATGTAAATGACGAAAAGAGTAGCTACTAGTGTAGCTGAATCCAGTATTGTATGGATGTCATACTCCATAACAAAGCTGCAGTACAACCTAAC
CGCCAGGAACAGTGCTGTTAAATCCTGAGACTTGAGTGAAAGTCCAGCGCAGGTCTTCTCCTTGGTGAGCTTGTAGATGAGCACGGCGATGCCGAGCGCG
TGCGCGGCCTCGGCGGCGACGAAGAGGTTGTCGTGGTCGTGGACGATGAAGCGGATGAAGACGAGCGCGGTCATGCCCGCGACGACGGCGAGGAAGGCCT
TGACCTTGGGCGGCTGCCTCCGCACCCAGCTCAGCACCACCGCCATCGGCCTCCGCGGCGCCCTCATCTCGGAGCTCCTCCCCGCGCGGTGGATACCTAG
GCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTAAA
CTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGG
CGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGA
TGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGC
AAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCT
GAGCTCCCAAGCAGTGGGAGGGGAAAGTGATCTCTGACCGCGTGCCTGTGAAGA
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