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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1568  (registered. 2012)
Contig Information
Length 1004 bp
Clones alternative view 6 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 1
Wh_SHDr Shoot grown with dessication 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XC Root, treated at 50 microM Al for 6h 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115439527|ref|NP_001044043.1|| Os01g0711000 [Oryza sativa (japonica cultivar-group)]
Score 560
Evalue 1.00E-157
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1568 
TCGGCACGAGGGGGGAACGACACATCGTGGGCGATCCTTTGAAGCCCCCCACATGCGACAGCCAAGCTCCGCCGCGGTCTGCGCTTCCGATCGAATCCGA
GGCTTCCTCTAAATTTCAAAAACATGGTTGTTGCAAACGGCAATGTCGACATGGAGGAAGGAACCCTTGAAATCGGGATTGAGTACAGGACAGTTTCTGG
AGTTGCTGGTCCTCTTGTGATTCTTGACAAAGTGAAGGGTCCTAAATACCAAGAAATCGTCAACATACGATTGGGAGATGGCACAACTAGGCGTGGTCAG
GTGCTTGAAGTTGATGGAGAGAAAGCTGTGGTTCAGGTTTTTGAGGGAACTTCTGGTATTGACAACAAATATACAACTGTGCAATTCACTGGTGAGGTTC
TAAAAACTCCAGTATCACTGGATATGCTTGGCCGCATTTTCAATGGTTCTGGGAAACCTATAGATAATGGCCCACCAATTTTACCAGAGGCGTACCTGGA
TATTTCCGGAAGTTCTATCAATCCCAGCGAACGGACATACCCTGAAGAAATGATTCAGACTGGCATATCTACAATTGATGTGATGAATTCTATAGCTCGT
GGTCAGAAGATACCTCTGTTCTCCGCTGCAGGTCTGCCACACAATGAAATTGCTGCTCAGATTTGTCGTCAGGCTGGGCTGGTAAAGCGTAAAGAGAAGA
CTGACAATATCTTGGAGAATGCCGAGGAAGACAATTTTGCTATTGTCTTTGCAGCTATGGGAGTAAACATGGAAACAGCACAATTTTTCAAGCGTGATTT
TGAGGAGAATGGTTCGATGGAGAGAGTTACCTTATTTCTTAATCTGGCAAATGATCCAACCATCGAGCGTATTATTACTCCAAGAATTGCTCTCACAACA
GCGGAGTACTTGGCATATGAGTGCGGGAAGCATGTTCTTGTCATCCTGACTGACATGAGTTCATATGCAGATGCACTTCGTGAAGTCTCTGCTGCTCGAG
AGGA
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