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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5822  (registered. 2012)
Contig Information
Length 977 bp
Clones alternative view 95 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_SH - 16
Wh_KMP Shoot grown under continuous light 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 9
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 12
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XE Seedling, infected with leaf rust 5
WH_XF Seedling, infected with leaf rust 14
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115793|sp|P27523.1|CB23_HORVU|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,"
Score 546
Evalue 2.00E-153
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5822 
TTTTTTTTTTGAACCAAAAAATCTTTTTTTTTTCGAGATCACATCGACCATTCGTTGCTATTTGCACACACATGGGAGTAGTTTACACTTTACAATGGCA
TGCCACCATGGCGCGTCGGCCAGCCTAAGATCCAGGCGCAAACTTGGTAGCGAAAACCCATGCATTGTTGGCGACAGGGTCGTCGAGGTGGTCGAACAGG
TTCTCCAATGGGCCCTTACCGGTGACGATAGCTTGGACGAAGAACCCAAACATAGAGAACATGGCGAGACGGCCATTCTTGATCTCCTTCACCTTAAGCT
CAGCGAAGGTGACAGGGTCGTCGGCAAGGCCGAGCGGGTCGAAGTACTGGCCGCCGGGGTAGAGGTCGTTGCCCTCGCCGACGCCATCGAGACCGTTGAT
GCGGAACCCTTCAACGAGACCCATGAGAAGGACCTGGAAGCCGAGCACGGCAAGGATGCTCTGCGCGTGGACGAGGTTGGGGTTCCCAAGGTAATCGAGG
CCACCCTCGGAGAAGATCTGCGAGCCGGCCTTGAACCAGACGGGCTCCTTGAACTCGACGCCCACCCACTTCTGGAGCACCTCGGGGAAGACGCACCCAA
GAGCGCCAAGCATCGCCCACCGCCCGTGGATCACCTCCAGCGCCCTGTTCCTCGCGAACGCCTCCGGGTCGGCAGAAAGCCCGGCGGTGTCCCAGCCGTA
GTCGCCGGGGAACTCGCCGTTCAGGTACGACGGCGTCTGCGCGGAGAAGGGGCCCAGGTACTTGACGCGGTCCGGGCCGTACCACAAGTCGTTGCCCATG
GTGATTCTGCCGTTGGCCGCGGCGGCGATGTCGCGGAGGGGGGTGGCGCTGGCGGCGCGGCCCTGGCCGCTGAGGAACGGGGTCTTGGCCACAACGGCGC
GGGAGGCGGCGGCCATGATCGTGGATGCCATGTGTGCTGCTCCGGGGTCCGTACGGTGGCCTAGCCGGCTGTGCTGC
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