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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig19113  (registered. 2007)
Contig Information
Length 1205 bp
Clones 7 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 2
Wh_EMC Dormant seed with cold treatment after water absorption 3
Wh_RDr Root of dessiccated seed 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0133900 [Oryza sativa (japonica cultivar-group)] >gi|108706041|gb|ABF93836.1| serine O-acetyltransferase family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113547350|dbj|BAF10793.1| Os03g0133900 [Oryza sativa (japonica cultivar-group)]
Score 1278
Evalue 1.2316e-138
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig19113 
CCCATCTACGTCATGGGGAGCTCGCGGGCGCGGGCCGTGCTCCTCGACCCCTCCGCCGCCGGGGACCCCATATGGGAGGCCGTCAAGGCCGAGGCCAGGT
CCGAGGCAGAGAAGGAGCCTATTTTAAGTAGCTTCTTATATGCGAGCGTATTATCTCACGACTGTCTGGAGCGGGCGTTGAGCTTTGTCCTTGCAAACAG
GCTTGAAGATCCAACCTTGCTTGCGACTCAGCTAATCGACATTTTCAATGATGTCATGATGAATGACGTAGATATACGCCGTTCCATTCGCCTTGATGCT
CAGGCCTTCAAAGGAAGAGATCCTTCCTGTGCACAATATAGCTGGGCCCTATTATACCTAAAGGGTTACCATTCCTTGCAGTCCTACAGGATAGCTCATG
TATTATGGAATCAAGGGCGTAAGGTTCTGGCGTTGGCGCTGCAAAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCTGCCAAAATTGGAGA
AGGAATATTGTTGGATCATGGAACAGGTCTAGTCATTGGTGAAACTGCTGTTGTTGGCAACTGGGTTTCATTAATGCAGGGTGTTACGCTTGGAGGTACT
GGAAAGGAACACGGAGATAGGCACCCCAAGATCGGTCAGGGAGCTCTTCTTGGAGCTGGTGCTACCATCCTTGGCAACATAACTGTAGGCGAAGGTGCCA
TGATTGCCGCTGGTTCCCTTGTTTTAAAGCATGTACCGCCTCACAGTATGGCGGTAGGAAATCCTGCGAAGGTAGTTGGCTATACAGAGAAAGAAGATCC
TTCGTTGACTATGAAGCATGATGCAAGGAGAGATTATTTTGAGCATGTTGCCGGTAGTTTTCCTGACAGTAGATCCAACGGAAGTGTCGTGAAATAAAAA
ACTTGCAAGGAGGAATGGAATTTTGGACATTTCTACATCCTGGTGGACGTACGGCGCTGGATATTTGGCGACGCCCGAGTGGTGCTTCCCCCTGCCCAGC
AACCCTCTTGTGAGATCATGCAGGCGAGCCCGCCAAGGGTCTCCGGAAGCTCCCCAGATGTATTTATCATGTGCCCTTAAACTGATGCAATAATGTGAAG
ATGTTTTCTGTAAAAACTGGAAGGAGTGGTACAGATATATAATCTGTAGAGATCTCCAGCGGCAAGCTGTAGATACCTCAGATCAGAGCGTGTGACCTCA
ACTAT
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