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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMC_all.Contig43
Contig Information
Length 1348 bp
Tissue Dormant seed with cold treatment after water absorption
Clones 2 Clones [Download: CSV  ,  FASTA ]
whec14k11    rwhec14k11   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os07g0668200 [Oryza sativa (japonica cultivar-group)] >gi|34393740|dbj|BAC83401.1| putative adenyl cyclase [Oryza sativa Japonica Group] >gi|50510075|dbj|BAD30727.1| putative adenyl cyclase [Oryza sativa Japonica Group] >gi|113612114|dbj|BAF22492.1| Os07g0668200 [Oryza sativa (japonica cultivar-group)] >gi|218200224|gb|EEC82651.1| hypothetical protein OsI_27260 [Oryza sativa Indica Group]
Score 1442
Evalue 1.3888e-157
Total Hit Count 27
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMC_all.Contig43 
ATCCTCTCCGCCTCTCACCGCGGGTGCGCGGCAGCCGCCGAGCTCGCGCTCCTGCCCCATCTCGAGAATGGCTTCCCCGCCTCGCGCTCCTCTCCAGATC
ACACCAGGAGCTTCTCCTCCCACCTACCTCGTACTTTGCTATCGCGAACCGTAACTTCTCACTGCCGGTGTAAGAAATCAGTGTGCTTGTGTAGCTATGC
ACACTCAAGCGGATATCACATGGCCAGAGCTCATTTGTCGACAGACTCAAGCGGAATCGACCAACCTAAAGAATCTGCAGAGGAGCTGTACCAGAAAATG
CTGAAGTCTGTTGAAGCCCAGACTATGCCGCCAAATGCCTGGTTGTGGTCAATGATCAGTAGTTGCTCCAGTGAGGAGGATATAAAACTTCTCTTTCAGA
TTTTGCAGAAGCTAAGAATATTCAGGCTATCAAATCTTCGCATCAATGCAAACTTCAACGACCATCTCTGTATGAAAGTTTCTGAGGCTTGTGCTCGTGT
GGGTGTCGTTGACTATGGGTTGAAGGTTTTATGGAATCATAATGTTTATGGAATAACGCCAACCATTGGTTCTGCCCATTATCTACTGCAACATGCTAAA
GAGCACAATGATACTAAACTAATGGAGAAGATAATGCAAGTCCTTAGAAGGAATTCCTTGCCATTACAACCAGGCACTGCTGATATTGTCTTCAGTATCT
GCTATAACACTGATAGATGGGATTTACTCTCAAAATATGCGGCAAGATTTGTTCAGGCTGGAGTCAAGTTGCGTCGTACTGCATTTGACGTATGGATGGA
ATTTGCTGCCAAAGTTGGAGATTCTCAATCTATATGGAACATCAATAGCCTGAGAGGCAAGTCTATCAAGCACTATACTCTTACATCAGGTTTTGCATGC
GTAAAGGGGTCTCTGCTTGAACGCAGGCCAGATAATGCAGCTGCCACCATTAAACTTCTTCACAAGCACCTGCCTGATCAGAAGAAACCATTTGTGAAAG
ATGAGCTCCAAAAGCTTGTTGCTGAATGGCCAACAGAGGTGATAAAAAGGCAGAAGAAAGATGAGAGGAAGGCAATGGAGGAAGCTTTGATTGAGGACAT
CCCAAAGATGATCAGCTCCATGTCGAAGTCGGGCCTCGATATTTCCGTGGATCTGGACAAGCTCACCCGTCAGCCTGAAGCAGCGTAGAGAAGCAACACC
GCTGCTGGACACCTCGACGCGGCAGCTGCAAATCCTGCGGCACCCCTGATACCCGAGGGCTGAGGAAAACATTTTTGACTGGGTGGGTTGCGGTGATCGG
TTTGACACGGTAGCACTAGAACCCTCCGATAATAACGTGTACACTATG
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