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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24844  (registered. 2007)
Contig Information
Length 3139 bp
Clones 43 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 4
Wh_RDr Root of dessiccated seed 8
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 2830
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24844 
CCTTTCATTCCGTCTCACGGATCGGGAGCGCCGCCGCTTCCCCACCTCTCGTCTCTCGGCGAACCCCCAAGGAACTATATTCCCAGTGTGATATCCAAAA
CCAGTCAAGATGGTGAAGTTTACAGCGGAGGAGCTCCGCGGAATTATGGACAAGAAAAATAATATTCGTAACATGTCTGTTATTGCTCATGTCGACCACG
GCAAGTCTACGCTTACGGATTCCCTTGTGGCAGCTGCTGGGATTATCGCCCAGGAAGTTGCTGGGGATGTTCGCATGACTGATACCCGTGCAGATGAGGC
AGAGCGTGGTATTACAATCAAATCCACGGGTATCTCTCTTTTCTATCAGATGACTCCTGAATCACTCGAGATGTACAAGGGCGACAGGGATGGTGATGAG
TACCTGATCAACCTTATTGATTCACCTGGCCACGTTGACTTTTCTTCAGAAGTCACAGCTGCTCTTCGTATCACTGATGGTGCCTTGGTTGTTGTTGACT
GTATTGAGGGTGTCTGTGTGCAGACTGAAACTGTGCTGCGCCAAGCTCTTGGTGAGAGGATTAGGCCTGTCCTTACTGTGAACAAGATGGACAGATGCTT
TCTTGAGCTTCAGTTTGAAGGTGAGGAAGCATACCAGACTTTCTCCCGTGTCATTGAAAATGCCAATGTCATCATGGCAACATATGAAGATGTGCTCCTT
GGTGATGTCCAAGTGTACCCAGAGAAGGGTACTGTTGCATTCTCTGCTGGTTTGCATGGATGGGCTTTCACCCTTACAAACTTTGCTAAGATGTATGCCT
CCAAGTTTGGTGTTGATGAGGTGAAGATGATGGAGAGGCTGTGGGGTGAGAACTTCTTTGACCCAGCCACAAAGAAATGGACCTCCAAGAACACTGGCAC
AGCTACCTGCAAGAGAGGTTTTGTTCAGTTCTGCTACGAGCCAATCAAGCAAATCATAGCCACCTGCATGAATGATCAGAAGGATAAGTTGTGGCCTATG
TTGAAGAAGCTTGGTGTGACGATGAAGAATGATGAGAAGGACTTGATGGGCAAGGCTCTCATGAAGCGTGTGATGCAAACTTGGCTGCCTGCCAGTCGTG
CTCTGCTTGAGATGATGATATTTCACCTCCCCTCTCCCTCGAAGGCACAGAGGTATCGTGTGGAGAACTTGTACGAGGGTCCCCTTGATGATATATATGC
TAATGCTATCAGAAACTGCGACCCTGATGGTCCTCTTATGCTGTATGTCTCCAAGATGATTCCAGCATCTGACAAGGGTAGATTCTTTGCCTTTGGACGC
GTTTTTGCCGGGAGGGTCGCAACTGGCATGAAGGTCCGTATCATGGGTCCCAACTTTGTTCCTGGCCAGAAGAAGGATCTATATGTGAAGAGTGTCCAGC
GGACTGTTATCTGGATGGGAAAGAAGCAAGAGTCTGTTGAGGATGTTCCCTGTGGTAACACTGTTGCTTTGGTTGGTTTGGATCAGTTCATCACCAAGAA
TGCAACCCTGACAAATGAGAAGGAAGTTGATGCCTGCCCAATCAGGGCTATGAAGTTCTCTGTGTCCCCTGTTGTGCGTGTTGCCGTTCAGTGCAAGGTG
GCATCTGATCTTCCTAAGCTTGTTGAGGGTTTGAAGCGTCTGGCCAAGTCTGATCCTATGGTTCTCTGTACCATTGAAGAGTCTGGTGAGCATATCATTG
CTGGAGCTGGAGAGCTTCATCTTGAAATCTGTCTGAAGGATCTGCAGGATGACTTCATGGGTGGTGCTGAAATTATTGTTTCCCCTCCTGTTGTTTCCTT
CCGTGAGACTGTTCTGGAGAAGTCCTGCCGCACTGTCATGAGCAAGTCCCCCAACAAGCATAACCGTCTTTACATGGAAGCTCGCCCATTGGGAGGAGGG
ATTGGCTGAGGCTATCGATGATGGCCGCATTGGCCCGCGTGATGATCCCAAGGTGCGGTCCAAGATCCTATCTGAGGAGTTTGGTTGGGACAAGGATCTC
GCCAAGAAGATTTGGTGCTTTGGACCTGAGACGACTGGCCCCAACATGGTTGTTGACATGTGTAAGGGAGTGCAGTATCTGAATGAAATCAAGGACTCTG
TTGTGGCTGGGTTCCAGTGGGCATCAAAAGAGGGAGCATTGTGTGAGGAGAACATGCGTGGCATCTGCTACGAGGTCTGTGATGTTGTTCTCCACACTGA
TGCTATTCACAGGGGTGGTGGTCAGGTTATCCCAACGGCGAGGAGGGTCATTTACGCTTCTCAGCTCACCGCCAAGCCAAGGCTGCTGGAGCCCGTGTAC
CTGGTTGAGATCCAGGCCCCCGAGAACGCACTTGGTGGTATCTATGGTGTGCTGAATCAGAAGAGAGGCCACGTGTTCGAGGAGATGCAGAGGCAAGGTA
CCCCACTGTACAACATCAAGGCCTACCTGCCTGTCATCGAGTCCTTCGGGTTCTCGAGCACCCTGAGGGCTGCGACGTCCGGCCAGGCCTTCCCCCAGTG
TGTGTTTGACCACTGGGACATCATGGCCTCCGATCCTTTGGACCCTGGCACCCAGTCGGCGACGCTCGTGACGGAGATCCGCAAGAGGAAGGGTCTCAAG
GAGCAGATGACTCCCCTATCCGATTTCGAGGACAAGCTCTAAATCTTGGGGTCATGTTTTGGTACTGGCTCTTGCTGTGAAGGGAGGCGCGGTATTTTTC
TCCCTATGTGTCTTCCTTACTATCTTGTTGTTTGTATGTGGTGCTACTGAGACTATGGTTTTGATGACGGTTGTGGTGATGTAACAGATGTTAAAACTTT
GATGATCTATCCCGTCGTCAGCTGGTGGTTATTTTTACTGTGCTGTGTTTGCTTTTGTGCTACATCTTGCTTTCATTTACGTATATTTGATTGTCGACCC
CTCGTGCCGAATTCGGCACGAGGGGCGGATTGGGCGGCCCAGATGGAGGTGGACGACCGCGTGGCGAAATCCGGGCCGTTGTAGCGCGGGCAGGAGATTT
AATTTTGCTCTCGGGTTGGGTTTGGTTTGTGTCCGCTTCTGCTGCTTGTTGTTGCCGTGCTCTAGGCTTAGTAAACTTGTTTCTGTTTGTCTGTATATAC
TGATAGTATTAATTAGGACAACACATTTGTGGGATCATG
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