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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig19763  (registered. 2003)
Contig Information
Length 979 bp
Clones 7 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 3
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_SHC Shoot grown with cold treatment 1
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 1
Homology (BLAST) Top Hit Os10g0412100 [Oryza sativa (japonica cultivar-group)] >gi|78708623|gb|ABB47598.1| endonuclease/exonuclease/phosphatase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|78708624|gb|ABB47599.1| endonuclease/exonuclease/phosphatase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113639196|dbj|BAF26501.1| Os10g0412100 [Oryza sativa (japonica cultivar-group)]
Score 877
Evalue 2.82097e-92
Total Hit Count 407
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig19763 
CAAGCGAAAAATCGCTAACAAAATAAAAATGGCAAGCTGAGAAAAAAAAGACCTTAAAAAATCTAGCCATGGGTGTCAGAATCTATTATCAATATTTCTC
TCAAAAGGATTTCTCTTCTATATAAAGTATAATATTACAAGGGGCAGCTTAAATATCATGAAGTTGAAATGTAAAAAGGGTAATAATCAACACTACACCA
GGCTCTCTTTTCCCAAGGTTGTTTCCTAAGACTGATTGACTGCTTCCCCGGCGATATGATCGCGTCTGCCCCTCCTCAACTTCCACCTTCCACCATGGAA
GTTAAACCTCCAGCATGGACGCTGATGTGACCATCTGTATGCGACCTAAGGCATCATCGTCTGATTCTAGGCTTGCAACGGAATTCTGCTAAAAGTGCTA
TGTGATCTGATGACCATTCAGGTGAAGGGAGAGCAGTGTCTTTTCTTAAGCTCTCCTCATCCAGAAGCTCCAATAAAGACTCCACTGACAACGAATCCGC
TGTGTAAAATATGTAATCAACAGTACCAGTGAAATCTCTTGTGCAATTTGTGAAAAGTGGTTCATTTGTTCCTGAGTCCATCCTCCTCCGCTGGTGCTCC
AAATCATAACCGACACCTACCATCCTTGCAAATGAAGAATATGCACTGACCAGAGGAAGCTGATGTGTCAGCTTGCTCACAGGGCGTAAAATTCCAAGGG
GGTCAATGGCCAGATCTGGATGCAATTGATCAACTTTGCCTATCGCAAGAAGCCCGTGTGGAGTACTCCCAGGGATTGAATTGAAATCCCCACAGACCAA
CATTGGAATGTCCGCACTGTTAGCTATCTTTTCCAATCCTTTCAAAAGTGTTTGAACCTCCCATAGCTTGACATCTTTGAGATCTTGGTGGACATTTACA
TGTGTATTGGCCACACAAAGGAGCTGTCTTTTAACCAAGGGTTTTCAGTTCCTTGGGTTGCCAAANTTTGGCTTCTAAG
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